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Table 1 Sequence variation in multiple sequences alignment between GPVs and MDPVs

From: Specific detection and differentiation of classic goose parvovirus and novel goose parvovirus by TaqMan real-time PCR assay, coupled with host specificity

  1. AThe variation marks as Bold and underline
  2. B1The GenBank accession numbers of GPVs (including N-GPVs) strains used in this study as following: KC996729, KT598506, HQ891825, KT598505, JF333590, KY511292, KR136258, U25749, KC996730, KC478066, KY475562, EU583390, KM272560, KC184133, EU583392, KR091960, EF515837, KC178571, AF416726, KU684472, KR091959, EU583391, EU583389, KT935536, KT935531, KX384726, KY679174, KT751090, MF441225, MF441224, MF441227, MF441223, MF441221, MF441222, MF441226, KU844283 and KT343253. Only mark the variation GenBank accession numbers of GPV (including N-GPV) strains
  3. B2The GenBank accession numbers of GPVs exclude MF441222
  4. B3The GenBank accession numbers of GPVs exclude KU684472
  5. B4The GenBank accession numbers of GPVs exclude EU583391, EU583389, KT343253 and MF441226
  6. C1 MDPV sequence compared with the GPV-qP, the variations are mark with square box, the results showed that the designed GPV-qP is specificity
  7. MDPV D1 The GenBank accession numbers of MDPV: U22967 and X75093
  8. MDPVD2The GenBank accession numbers of MDPV: KU844282, KU844281, KT865605, KX000918, JF926697, KC171936, JF926698 and KY744743
  9. MDPVD3The GenBank accession numbers of MDPV: KY069274, JF926695, KY511293 and JF926696
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BMC Veterinary Research

ISSN: 1746-6148

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