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Table 2 Variations in ITS region sequences of SSU rRNA genes of Enterocytozoon bieneusi isolates identified in this study and comparison with three known genotypes

From: Identification of Enterocytozoon bieneusi in goats and cattle in Thailand

Genotypes (no.)

Nucleotide at position

GenBank accession no.

21

95

126

131

134

163

245

246

Novel

GoatAYE1

–

–

–

–

–

–

T

–

MK165088

 

GoatAYE2

–

–

G

–

–

–

–

–

MK165089

Known

H

–

–

A

–

–

–

C

–

KP318000

Novel

GoatAYE3

–

C

–

–

–

A

–

–

MK473332

Known

CHC8

–

T

–

–

–

G

–

–

MK573332

Novel

GoatAYE4

–

–

–

–

A

–

–

–

MK473333

Known

CHG3

–

–

–

–

G

–

–

–

MH822618

Novel

PigAYE1

A

–

–

–

–

–

–

–

MK165090/ MK165091

 

PigAYE3

A

–

–

–

–

–

–

C

MK165093

Known

CS-10

G

–

–

–

–

–

–

A

KP259313

Novel

PigAYE2

–

–

–

C

–

–

–

–

MK165092

Known

PigEBITS5

–

–

–

T

–

–

–

–

MG736666