Table 1 List of field isolates used in the study
From: Increased genetic variation of bovine viral diarrhea virus in dairy cattle in Poland
Isolate | Year of islolation | Farm | Sample | Region of isolation | Subtype | Accesion numer | |
|---|---|---|---|---|---|---|---|
5’UTR | Npro | ||||||
164-DM/15 | 2015 | 1 | Serum | Lublin Voivodeship | 1f | MK044822 | MK381419 |
165-DM/15 | 2015 | 1 | Serum | Lublin Voivodeship | 1f | MK044823 | – |
166-KY/15 | 2015 | 2 | Serum | Kuyavian-Pomeranian Voivodeship | 1 s | MK044824 | MK381420 |
167-KY/15 | 2015 | 2 | Serum | Kuyavian-Pomeranian Voivodeship | 1 s | MK044825 | – |
168-WS/15 | 2015 | 3 | Serum | Wielkopolska Voivodeship | 1 g | MK044826 | MK381421 |
169-WS/15 | 2015 | 3 | Serum | Wielkopolska Voivodeship | 1 g | MK044827 | – |
170-SR/16 | 2016 | 4 | Serum | Wielkopolska Voivodeship | 1 g | MK168328 | – |
171-SR/16 | 2016 | 4 | Serum | Wielkopolska Voivodeship | 1 g | MK168329 | MK381422 |
172-EP/16 | 2016 | 5 | Serum | Lublin Voivodeship | 1b | MK168330 | – |
173-EP/16 | 2016 | 5 | Serum | Lublin Voivodeship | 1b | MK168331 | MK381423 |
174-DS/15 | 2015 | 6 | Serum | Wielkopolska Voivodeship | 1d | MK168332 | – |
175-DS/15 | 2015 | 6 | Serum | Wielkopolska Voivodeship | 1d | MK168333 | – |
176-KR/15 | 2015 | 7 | Serum | Kuyavian-Pomeranian Voivodeship | 1 s | MK168334 | MK381424 |
177-EP/16 | 2016 | 5 | Serum | Lublin Voivodeship | 1b | MK168335 | – |
178-DM/15 | 2015 | 1 | Serum | Lublin Voivodeship | 1f | MK168336 | – |
179-WD/17 | 2017 | 8 | Serum | Lublin Voivodeship | 1f | MK381356 | – |
180-WD/17 | 2017 | 8 | Serum | Lublin Voivodeship | 1f | MK381357 | – |
181-WD/17 | 2017 | 8 | Serum | Lublin Voivodeship | 1f | MK381358 | MK381425 |
183-SY/17 | 2017 | 9 | Serum | Świętokrzyskie Voivodeship | 1r | MK381359 | MK381426 |
184-KN/17 | 2017 | 10 | Serum | Wielkopolska Voivodeship | 1d | MK381360 | MK381427 |
185-KN/17 | 2017 | 10 | Serum | Wielkopolska Voivodeship | 1d | MK381361 | – |
186-KM/17 | 2017 | 11 | Serum | Wielkopolska Voivodeship | 1b | MK381362 | MK381428 |
187-AN/17 | 2017 | 12 | Serum | Wielkopolska Voivodeship | 1b | MK381363 | MK381429 |
188-LS/17 | 2017 | 13 | Serum | Wielkopolska Voivodeship | 1d | MK381364 | MK381430 |
189-JA/17 | 2017 | 14 | Serum | Wielkopolska Voivodeship | 1b | MK381365 | MK381431 |
190-JA/17 | 2017 | 14 | Serum | Wielkopolska Voivodeship | 1b | MK381366 | – |
191-KW/17 | 2017 | 15 | Serum | Łódź Voivodeship | 1f | MK381367 | MK381432 |
192-KW/17 | 2017 | 15 | Serum | Łódź Voivodeship | 1f | MK381368 | – |
193-CZ/17 | 2017 | 16 | Serum | Wielkopolska Voivodeship | 1 g | MK381369 | MK381433 |
194-TC/17 | 2017 | 17 | Serum | Wielkopolska Voivodeship | 1b | MK381370 | – |
195-RM/17 | 2017 | 18 | Serum | Kuyavian-Pomeranian Voivodeship | 1f | MK381371 | MK381434 |
196-KN/17 | 2017 | 10 | Serum | Wielkopolska Voivodeship | 1d | MK381372 | MK381435 |
197-BA/17 | 2017 | 19 | Serum | Wielkopolska Voivodeship | 1b | MK381373 | – |
198-BA/17 | 2017 | 19 | Serum | Wielkopolska Voivodeship | 1b | MK381374 | – |
199-BA/17 | 2017 | 19 | Serum | Wielkopolska Voivodeship | 1b | MK381375 | – |
200-BA/17 | 2017 | 19 | Serum | Wielkopolska Voivodeship | 1b | MK381376 | MK381436 |
201-BA/17 | 2017 | 19 | Serum | Wielkopolska Voivodeship | 1b | MK381377 | – |
202-BA/17 | 2017 | 19 | Serum | Wielkopolska Voivodeship | 1b | MK381378 | – |
203-TF/17 | 2017 | 20 | Serum | Mazovian Voivodeship | 1 g | MK381379 | – |
204-TF/17 | 2017 | 20 | Serum | Mazovian Voivodeship | 1 g | MK381380 | – |
205-TF/17 | 2017 | 20 | Serum | Mazovian Voivodeship | 1 g | MK381381 | – |
206-KN/17 | 2017 | 10 | Serum | Wielkopolska Voivodeship | 1 g | MK381382 | – |
207-LK/18 | 2018 | 21 | Serum | Wielkopolska Voivodeship | 1b | MK381383 | MK381437 |
208-KT/18 | 2018 | 22 | Serum | Lublin Voivodeship | 1b | MK381384 | MK381438 |
209-KT/18 | 2018 | 22 | Serum | Lublin Voivodeship | 1b | MK381385 | MK381439 |
210-GK/18 | 2018 | 23 | Serum | Lublin Voivodeship | 1f | MK381386 | MK381440 |
211-DK/18 | 2018 | 24 | Lung | Mazovian Voivodeship | 1r | MK381387 | MK381441 |
213-GK/18 | 2018 | 23 | Serum | Lublin Voivodeship | 1f | – | MK381442 |
214-MS/18 | 2018 | 25 | Serum | Wielkopolska Voivodeship | 1f | MK381388 | MK381443 |
215-BK/18 | 2018 | 26 | Serum | Świętokrzyskie Voivodeship | 1 g | MK381389 | MK381444 |
216-JB/18 | 2018 | 27 | Serum | Wielkopolska Voivodeship | 1 g | MK381390 | MK381445 |
217-SM/18 | 2018 | 28 | Serum | Podlaskie Voivodeship | 1e | MK381391 | MK381446 |
218-KH/18 | 2018 | 29 | Ear notch | Opole Voivodeship | 1r | MK381392 | – |
219-KH/18 | 2018 | 29 | Ear notch | Opole Voivodeship | 1f | MK381393 | – |
220-KH/18 | 2018 | 29 | Ear notch | Opole Voivodeship | 1f | MK381394 | – |
221-KH/18 | 2018 | 29 | Ear notch | Opole Voivodeship | 1f | MK381395 | MK381447 |
222-KH/18 | 2018 | 29 | Ear notch | Opole Voivodeship | 1r | MK381396 | – |
223-DA/18 | 2018 | 30 | Ear notch | Wielkopolska Voivodeship | 1 g | MK381397 | – |
224-DA/18 | 2018 | 30 | Ear notch | Wielkopolska Voivodeship | 1 g | MK381398 | – |
225-DA/18 | 2018 | 30 | Ear notch | Wielkopolska Voivodeship | 1 g | MK381399 | – |
226-DA/18 | 2018 | 30 | Ear notch | Wielkopolska Voivodeship | 1 g | MK381400 | – |
228-DA/18 | 2018 | 30 | Ear notch | Wielkopolska Voivodeship | 1 g | MK381401 | – |
232-DA/18 | 2018 | 30 | Ear notch | Wielkopolska Voivodeship | 1 g | MK381402 | – |