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Table 3 Pairwise comparison of 3D and VP1 genes of Thai CaKoVs (CU-101) and reference CaKoVs

From: First detection and genetic characterization of canine Kobuvirus in domestic dogs in Thailand

Viruses Accession number Year Country % nucleotide identity (% amino acid identity)
3D VP1
CaKoV/CU-101/THA/2016 This study 2016 Thailand 100 (100) 100 (100)
CaKoV/CU-53/THA/2016 This study 2016 Thailand 99.5 (100) 99.9 (100)
CaKoV/CU-83/THA/2016 This study 2016 Thailand 98.8 (100) 99.7 (100)
CaKoV/CU-100/THA/2016 This study 2016 Thailand 97.9 (100) 93.6 (97.8)
CaKoV/CU-125/THA/2016 This study 2016 Thailand 97.1 (98.6) 94.9 (97.8)
CaKoV/CU-224/THA/2017 This study 2017 Thailand 98.6 (100) 93.6 (97.8)
CaKoV/CU-241/THA/2017 This study 2017 Thailand 99.0 (100) 94.5 (98.7)
CaKoV/CU-249/THA/2017 This study 2017 Thailand 98.8 (100) 93.6 (97.4)
CaKoV/CU-250/THA/2017 This study 2017 Thailand 98.1 (100) 96.6 (96.9)
CaKoV/CU-260/THA/2017 This study 2017 Thailand 98.6 (100) 93.4 (96.9)
CaKoV/CU-273/THA/2017 This study 2017 Thailand 98.6 (100) 98.5 (99.1)
CaKoV/CU-716/THA/2018 This study 2018 Thailand 98.8 (100) 94.3 (98.7)
CaKoV/26/BRA/2016 MH747478 2016 Brazil 97.1 (99.3) 82.2 (84.2)
CaKoV/CE9/AUS/2012 MH052678 2012 Australia 97.6 (100) 83.7 (87.7)
CaKoV/B103/TZ/2010 KM068051 2010 African 93.6 (98.6) 84.8 (88.2)
CaKov/75/TZ/2011 KM068050 2011 African 94.0 (97.9) 83.8 (86.4)
CaKoV/82/TZ/2010 KM068049 2010 African 94.5 (98.6) 84.3 (86.4)
CaKoV/DD2/TZ/2003 KM068048 2003 African 94.8 (99.3) 84.0 (87.7)
CaKoV/UK003/UK/2008 KC161964 2008 UK 96.0 (100) 85.3 (88.2)
CaKoV/US-PC0082/USA/2010 JN088541 2010 USA 94.0 (99.3) 84.5 (86.4)
CaKoV/AN211D/USA/2009 JN387133 2009 USA 95.2 (99.3) 84.4 (86.8)
CaKoV/86c/IT/2012 KC693050 2012 Italy 96.0 (99.3) N/A
CKoV/19c/IT/2012 KC693045 2012 Italy 96.2 (99.3) N/A
CaKoV/Ca-Gifu0226/JPN/2014 LC147655 2014 Japan 97.6 (99.3) N/A
CaKoV/Ca-Tokyo1173/JPN/2012 LC147656 2012 Japan 97.9 (100) N/A
CaKoV/12D049/KOR/2012 KF924623 2012 Korea 97.1 (100) 84.7 (89.0)
CaKoV/CH-1/CHN/2011 JQ911763 2016 China 97.9 (100) 91.3 (89.9)
CaKoV/SMCD-59/CHN/2015 MF062158 2015 China 97.1 (100) 96.4 (96.9)
CaKoV/SMCD-57/CHN/2015 MF062173 2015 China 97.9 (100) 96.8 (97.8)