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Table 1 CCR5 variants found in the survey, position and frequencies (Caprine Reference Sequence HQ650162.1)

From: A single nucleotide variant in the promoter region of the CCR5 gene increases susceptibility to arthritis encephalitis virus in goats

Variation Region of interest Frequency % (MAF)
g.186_188InsTC Promoter 0.17
g.226 G > A Promoter 0.17
g.551 C > G Promoter 0.14
g.925 C > A Promoter 0.17
g.1059 C > T Promoter 0.19
g.1394 C > T Promoter 0.17
g.2170 T > C Intron 0.17
g.2573 A > C Intron 0.03
g.2791 C > T Intron 0.14
g.3023 T > C Intron 0.03
g.3167 T > C Intron 0.03
g.3203 T > C Intron 0.17
g.3876 T > C Exon 2 CDS 0.14
g.4553 C > T Exon 2 3′-UTR 0.17
g.4918 C > T Downstream 3′- UTR 0.14
g.5089 G > C Downstream 3′- UTR 0.03
g.5110 G > C Downstream 3′- UTR 0.03