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Table 2 The homological analysis between different strains

From: Detection and genetic characteristics of porcine circovirus 3 based on oral fluids from asymptomatic pigs in central China

Isolated strains in this study

Each other

PCV3 reference strain (KX778720, KX966193)

PCV1 reference strain (KJ408798, DQ650650)

PCV2 reference strain (FJ870968, AF055394, EU148503)

Complete genome (nt)

98.7%~ 99.9%

98.7%~ 99.5%

45.3%~ 45.5%

46.0%~ 46.8%

Cap gene (nt/aa)

98.0%~ 100%/

98.0%~ 99.8%/

44.0%~ 44.8%/

43.7%~ 45.1%/

96.7%~ 100%

98.1%~ 100%

23.0%~ 25.4%

25.9%~ 26.4%