Assay name | Primer & Probe | Nucleotide sequence (5′ - 3′) | Nucleotide Positiona | Target gene | Amplicon |
---|---|---|---|---|---|
SVV real-time RT-PCR | SVV-F | AACCGGCTGTGTTTGCTAGAG | 59–79 | 5′ UTR | 147 bp |
SVV-R | GAACTCGCAGACCACACCAA | 205–186 | |||
SVV-P | 6/FAM-CCAAAGGTGTTAGCGCACCCAAACG/IBFQ | 143–167 | |||
SVV RT-iiPCR | SVV iiF | GAAGCCATGCTCTCCTACTTCAAA | 7033–7056 | 3D | 87 bp |
SVV iiR | TTCTTTTCCAGAATGTTGAGCCA | 7119–7097 | |||
SVV iiP | 6/FAM-TCGAGAAGCTGCAATCTG/MGB-NFQ | 7070–7086 |