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Table 2 Sequence identities (%) of nt and aa between SH12/DH13 and other novel WRVs, classical WRVs, and chicken ARVs

From: Molecular characterization of two novel reoviruses isolated from Muscovy ducklings in Guangdong, China

Gene/Protein

SH12 vs novel WRVs

SH12 vs classical WRVs

SH12 vs chicken ARVs

SH12 vs DH13

DH13 vs novel WRVs

DH13 vs classical WRVs

DH13 vs chicken ARVs

nt

aa

nt

aa

nt

aa

nt

aa

nt

aa

nt

aa

nt

aa

λA

86.3–98.8

97.8–99.8

85.6–86.7

97.0–97.4

77.2–77.8

94.5–95.0

99.6

99.8

86.3–98.8

97.8–99.9

85.4–86.6

97.1–97.4

77.2–77.7

94.6–95.0

λB

87.5–98.2

97.2–99.5

87.3–88.3

96.9–97.9

75.6–76.9

91.0–91.2

97.7

99.0

87.1–98.2

97.0–99.4

87.5–88.3

96.7–97.8

75.4–77.0

90.7–91.0

λC

96.4–99.1

98.4–99.5

79.0–80.7

92.0–93.3

70.1–70.4

79.0–80.0

99.2

99.1

96.3–99.1

98.2–99.5

79.0–80.6

91.8–93.3

70.3–70.5

79.0–80.0

μA

95.9–98.5

97.1–99.5

79.7–95.1

90.8–97.0

73.3–73.6

85.9–87.0

98.0

98.9

95.6–98.2

96.9–99.0

79.8–94.9

91.0–96.7

73.5–73.7

86.2–87.0

μB

88.1–98.5

96.1–99.4

63.8–67.9

76.3–76.7

76.7–77.5

89.6–90.0

99.1

99.1

88.0–98.4

95.9–99.1

64.0–68.0

76.3–76.7

76.6–77.1

89.3–90.0

μNS

94.5–99.0

96.1–98.9

79.2–86.0

90.1–93.9

71.5–71.7

79.7–80.2

98.1

97.6

94.1–98.6

95.6–98.3

79.1–86.0

89.4–93.5

71.3–71.5

79.5–80.0

p10

95.6–99.0

99.0–100

38.1–39.5

9.6–10.8

53.5–54.7

33.0–34.0

98.6

100

95.6–99.0

99.0–100

37.4–38.8

9.6–10.8

37.9–54.4

33.0–34.0

p17/p18

98.3–99.5

93.9–98.3

10.9–11.6

14.9–17.1

99.4

97.8

98.2–99.5

93.9–98.3

10.9–11.6

15.5–16.6

σC

91.2–99.0

95.0–98.4

51.7–53.0

42.0–42.4

40.8–43.0

27.4–28.1

98.4

98.4

90.5–98.1

94.4–97.5

51.7–53.0

40.9–41.3

41.0–43.3

28.1–28.7

σA

88.2–99.4

97.6–100

87.2–95.4

96.4–99.0

76.8–77.5

90.4–91.8

99.1

99.5

87.3–99.1

97.1–99.5

86.6–94.9

95.9–98.6

76.8–77.5

89.9–91.3

σB

94.6–99.6

94.3–100

65.6–67.1

68.7–69.2

64.9–66.2

68.4–69.5

99.6

99.2

94.2–99.3

93.5–99.2

65.3–66.7

68.1–68.7

64.5–65.8

67.8–68.9

σNS

93.0–98.6

96.7–99.2

84.2–91.0

95.6–97.0

78.2–78.3

90.2–90.5

99.8

99.5

92.4–98.4

96.2–98.6

84.1–90.9

95.1–96.5

78.0–78.1

89.6–89.9

  1. novel WRVs: waterfowl-origin reovirus isolates ZJ00M, TH11, 091, NP03, HN5d, SD-12, J18 and 03G
  2. classical WRVs: waterfowl-origin reovirus isolates D20/99, 815–12, ZJ2000M, D1546 and D2044
  3. chicken ARVs: chicken-origin reovirus isolates 138, C98, S1133 and T-98
  4. nt nucleotide sequence
  5. aa amino acid sequence