From: Characterisation of Pasteurella multocida isolates from pigs with pneumonia in Korea
Gene function | Target gene | Description | Sequence (5′ – 3′) | size (bp) | Reference |
---|---|---|---|---|---|
Capsule serotypes | kmt1 | Identification of all P. multocida isolates | ATCCGCTATTTACCCAGTGG GCTGTAAACGAACTCGCCAC | 460 | [19] |
hyaD-hyaC | Serogroup A cap gene | TGCCAAAATCGCAGTGAG TTGCCATCATTGTCAGTG | 1044 | [20] | |
bcbD | Serogroup B cap gene | CATTTATCCAAGCTCCACC GCCCGAGAGTTTCAATCC | 760 | [20] | |
dcbF | Serogroup D cap gene | TTACAAAAGAAAGACTAGGAGCCC CATCTACCCACTCAACCATATCAG | 657 | [20] | |
ecbJ | Serogroup E cap gene | TCCGCAGAAAATTATTGACTC GCTTGCTGCTTGATTTTGTC | 511 | [20] | |
fcbD | Serogroup F cap gene | AATCGGAGAACGCAGAAATCAG TTCCGCCGTCAATTACTCTG | 851 | [20] | |
Outer membrane and porin proteins | oma87 | Outer membrane protein 87 | ATGAAAAAACTTTTAATTGCGAGC TGACTTGCGCAGTTGCATAAC | 948 | [17] |
ompH | Outer membrane protein H | CGCGTATGAAGGTTTAGGT TTTAGATTGTGCGTAGTCAAC | 438 | [17] | |
plpB | Outer membrane protein | TTTGGTGGTGCGTATGTCTTCT AGTCACTTTAGATTGTGCGTAG | 282 | [18] | |
psl | Porin protein | TCTGGATCCATGAAAAAACTAACTAAAGTA AAGGATCCTTAGTATGCTAACACAGGACGACG | 470 | [17] | |
Adhesins | fimA | Fimbriae | CCATCGGATCTAAACGACCTA AGTATTAGTTCCTGCGGGTG | 866 | [18] |
pfhA | Filamentous haemagglutinin | AGCTGATCAAGTGGTGAAC TGGTACATTGGTGAATGCTG | 275 | [21] | |
ptfA | Fimbriae | TGTGGAATTCAGCATTTTAGTGTGTC TCATGAATTCTTATGCGCAAAATCCTGCTGG | 488 | [17] | |
hsf-1 | Autotransporter adhesion | TTGAGTCGGCTGTAGAGTTCG ACTCTTTAGCAGTGGGGACAACCTC | 654 | [18] | |
hsf-2 | Autotransporter adhesion | ACCGCAACCATGCTCTTAC TGACTGACATCGGCGGTAC | 433 | [18] | |
Superoxide dismutases | sodA | Superoxide dismutases | TACCAGAATTAGGCTACGC GAAACGGGTTGCTGCCGCT | 361 | [17] |
sodC | Superoxide dismutases | AGTTAGTAGCGGGGTTGGCA TGGTGCTGGGTGATCATCATG | 235 | [17] | |
Iron acquisition related factor | exbB | Iron regulated and acquisition factors | TTGGCTTGTGATTGAACGC TGCAGGAATGGCGACTAAA | 283 | [18] |
exbBD-tonB | Iron acquisition related factors | GGTGGTGATATTGATGCGGC GCATCATGCGTGCACGGTT | 1144 | [17] | |
fur | Iron regulated and acquisition factors | GTTTACCGTGTATTAGACCA CATTACTACATTTGCCATAC | 244 | [18] | |
tbpA | Iron acquisition related factor | TGGTTGGAAACGGTAAAGC TAACGTGTACGGAAAAGCC | 728 | [21] | |
hgbA | Haemoglobin binding protein | TGGCGGATAGTCATCAAG CCAAAGAACCACTACCCA | 419 | [17] | |
hgbB | Haemoglobin binding protein | TCATTGAGTACGGCTTGAC CTTACGTCAGTAACACTCG | 499 | [21] | |
Neuraminidases | nanB | Neuraminidases | GTCCTATAAAGTGACGCCGA ACAGCAAAGGAAGACTGTCC | 554 | [17] |
nanH | Neuraminidases | GAATATTTGGGCGGCAACA TTCTCGCCCTGTCATCACT | 360 | [17] | |
Hyaluronidase | pmHAS | Hyaluronidase | TCAATGTTTGCGATAGTCCGTTAG TGGCGAATGATCGGTGATAGA | 430 | [18] |
Toxin | toxA | Dermonecrotic toxin | TCTTAGATGAGCGACAAGG GAATGCCACACCTCTATAG | 846 | [21] |