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Table 2 Comparison of the complete genomic sequences of the different PCV2 strains examined in this study

From: Genetic analysis of porcine circovirus type 2 (PCV2) strains between 2002 and 2016 reveals PCV2 mutant predominating in porcine population in Guangxi, China

  KX828215 (PCV2a) New strain (PCV2a) AY916791 (PCV2b) New strains (PCV2b) KJ187306 (PCV2d) New strains (PCV2d) EF524526 (PCV2e) New strains (PCV2e) JX506730 (PCV2h) New strains (PCV2h) EU148503 (PCV2c) LC004750 (PCV2f) JX099786 (PCV2g)
KX828215 (PCV2a) 100.0 96.6 95.2 95.1~95.5 94.9 94.5~95.4 96.4 95.3~96.7 96.0 95.9~96.0 94.1 95.1 95.3
New strain (PCV2a)   100.0 94.6 94.4~95.2 94.2 93.7~94.5 96.6 95.2~96.9 95.4 95.2 93.2 95.1 94.1
AY916791 (PCV2b)    100.0 97.0~99.4 95.9 95.4~96.3 95.5 93.9~95.7 96.4 96.1~96.2 94.8 95.6 95.5
New strains (PCV2b)     97.1~100.0 95.9~97.2 95.1~97.3 95.2~95.9 93.9~97.2 96.0~96.7 96.0~97.2 94.5~95.3 95.4~96.0 95.5~97.2
KJ187306 (PCV2d)      100.0 97.9~99.7 95.0 94.2~95.3 97.6 96.6~96.7 94.5 95.5 96.6
New strains (PCV2d)       97.1~99.8 94.3~95.4 93.2~95.7 96.0~96.9 96.0~97.1 93.9~94.9 95.0~95.9 96.2~97.0
EF524526 (PCV2e)        100.0 97.6~99.4 95.9 95.5~95.6 94.1 96.1 94.7
New strains (PCV2e)         96.8~99.7 94.5~96.3 94.9~96.0 92.8~94.2 94.9~97.4 93.8~95.0
JX506730 (PCV2h)          100.0 98.4 95.0 96.0 95.8
New strains (PCV2h)           99.7 94.8~94.9 96.1~96.2 96.8~96.9
EU148503 (PCV2c)            100.0 94.7 94.8
LC004750 (PCV2f)             100.0 95.5
JX099786 (PCV2g)              100.0