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Table 1 Prediction of transcription factors based on the goose miR29c upstream sequencea

From: Role of miR29c in goose fatty liver is mediated by its target genes that are involved in energy homeostasis and cell growth

Name

Position (strand)

Core match

Matrix match

Sequence on the (+) strand

HLF

134(−)

1

0.936

atttGTAAC

RFX1

285(+)

0.98

0.98

aggttgcatgGAAACca

FOXD3

581(+)

0.986

0.986

aaTTGTTttttt

  1. aThe prediction was performed using the ‘Match’ program with default parameters (http://www.gene-regulation.com). The goose miR29c upstream sequence is shown in Additional file 2: Figure S1