Fig. 2

Normalized number of reads that aligned to the La Sota viral genome and to specific gene segments: Fusion glycoprotein (F), Hemagglutinin-neuraminidase (HN), RNA-directed RNA polymerase L (L), Matrix protein (M), Nucleoprotein (NP), and Phophoprotein (P). Reads were extracted from treated individuals by genetic line and time point and aligned to the NDV La Sota genome. Bars indicate normalized number of reads with standard error. A higher number of reads aligned to the viral genome in Leghorn at 2 dpi and 6 dpi, with no reads detectable in either line at 10 dpi