Table 1 OTUs identified as significantly differentially abundant (p ≤ 0.05) from all other rabbit sources with LDA scores ≥ 3.0
Commercial meat | Companion | Laboratory | Shelter |
|---|---|---|---|
Unclassified Ruminococcaceae Tissierella Unclassified Aerococcaceae Erysipelothrix Facklamia Unclassified Pseudomonadaceae Paenalcaligenes Ignatzschineria Oligella Escherichia_Shigella Oceanisphaera Stenotrophomonas | Unclassified Bacteroidetes Unclassified Lachnospiraceae Unclassified Bacillaceae_2 Campylobacter Unclassified Desulfovibrionaceae TM7_genus_incertae_sedis Persicirhabdus Unclassified Verrucomicrobiaceae | Unclassified Firmicutes Unclassified Clostridia Flavonifractor Pseudoflavonifractor Anaerostipes Lutispora Lachnospira Acetivibrio Unclassified Alphaproteobacteria Unclassified Betaproteobacteria | Corynebacterium Unclassified Bacteroides Barnesiella Acetitomaculum Unclassified Erysipelotrichaceae Bacillus Pseudomonas |