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Table 2 ompA and MLST primers used in this study

From: Asymptomatic infections with highly polymorphic Chlamydia suis are ubiquitous in pigs

Chlamydia

Target

Primer/probe

Sequence (5'-3')

Amplicon Size (bp)

MLST fragment (bp)

C. suis

Cs_ompA

VD 1-2

UP

TTGAACATTTGGGATCGTTTTGA

491

_

DN

CCAATGTAAGGAGTGAACATATTTAATCTG

gatA

UP

TAAAAGTGCTTTAGAATTAAGAGATGCTGT

539

425

DN

AGATGCTGGCTGACGAATCGA

oppA_3

UP

AGATATCAGTGGGAATCTGCTTGC

674

468

DN

TAAGGATTTTTTTCCAATTTAAGCCAT

hflX

UP

CTCTCCCTCTCAACAACGGAACTT

616

435

DN

TTCAATAACATGCAGCAAAATATCCTC

gidA

UP

TTTGGGAGTTTCTACGAAGGAAGG

570

474

DN

ATAATTTCATATTGTACATCGAAAGGCAT

enoA

UP

TCTCGGGGTCTCTTTAGCATTAGC

590

381

DN

CTCCAACGAGTTGAATACGATCTCC

hemN

UP

GAAGAGCTTGCTATTGAATTTGATCC

608

432

DN

CGTTTTGTAGATAGATTCCTCGAATGA

fumC

UP

CTCTTATGGGAAAGAATTGATGCCT

641

465

DN

TACTTTCTCTACAAAACCTTCAGGAACATT

C. abortus

Cab_ompA

UP

TACAAGCCTTGCCTGTAGGGAAC

360

_

DN

CAGAAAATATCAAAGCGATCCCAG

C. pecorum

Cpe_ompA

UP

ATGAAAAAACTCTTAAAATCGGCGT

420

_

DN

CAGAAAATATCAAAGCGATCCCAG