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Table 3 Pairwise comparisons of the BbSBP-4 nucleotide gene sequences of South African Babesia bovis isolates and GenBank strains

From: In silico and phylogenetic analyses of partial BbRAP-1, BbCP2, BbSBP-4 and BbβTUB gene sequences of Babesia bovis isolates from cattle in South Africa

Isolate origin   01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22
South Africa 01 100 100 94.5 94.5 94.2 94.4 94.4 93.7 94.4 94.5 94.5 94.5 94.8 94.8 98.3 98.1 98.3 98.1 98.3 98.8 100 100
Ghana 02   100 94.5 94.5 94.2 94.4 94.4 93.7 94.4 94.5 94.5 94.5 94.8 94.8 98.3 98.1 98.3 98.1 98.3 98.8 100 100
Brazil 03    100 100 99.7 99.9 99.9 99.2 99.9 100 100 100 98.6 98.6 96.1 95.9 96.1 96.2 96.2 95.6 94.5 94.5
Japan 04     100 99.7 99.9 99.9 99.2 99.9 100 100 100 98.6 98.6 96.1 95.9 96.1 96.2 96.2 95.6 94.5 94.5
Mongolia 05      100 99.6 99.6 99.2 99.6 99.7 99.7 99.7 98.3 98.3 95.8 95.6 95.8 95.9 95.9 95.4 94.2 94.2
Syria 06       100 99.7 99.0 99.7 99.9 99.9 99.9 98.5 98.5 95.9 95.8 95.9 96.1 96.1 95.5 94.4 94.4
Syria 07        100 99.0 99.7 99.9 99.9 99.9 98.5 98.5 95.9 95.8 95.9 96.1 96.1 95.5 94.4 94.4
Thailand 08         100 99.0 99.2 99.2 99.2 97.9 97.9 95.2 95.1 95.2 95.4 95.4 94.8 93.7 93.7
Thailand 09          100 99.9 99.9 99.9 98.5 98.5 95.9 95.8 95.9 96.1 96.1 95.5 94.4 94.4
Thailand 10           100 100 100 98.6 98.6 96.1 95.9 96.1 96.2 96.2 95.6 94.5 94.5
USA 11            100 100 98.6 98.6 96.1 95.9 96.1 96.2 96.2 95.6 94.5 94.5
USA 12             100 98.6 98.6 96.1 95.9 96.1 96.2 96.2 95.6 94.5 94.5
MP-C18 13              100 100 96.3 96.2 96.3 96.5 96.5 95.9 94.8 94.8
NW-C4 14               100 96.3 96.2 96.3 96.5 96.5 95.9 94.8 94.8
GP-C17 15                100 99.9 100 99.9 99.7 99.5 98.3 98.3
INDIA 16                 100 99.9 99.7 99.6 99.3 98.1 98.1
KZN-C1 17                  100 99.9 99.7 99.5 98.3 98.3
NW-C2 18                   100 99.9 99.3 98.1 98.1
GP-C7 19                    100 99.5 98.3 98.3
GP-C15 20                     100 98.8 98.8
KZN-C2 21                      100 100
WC-10270 22                       100
  1. Accession numbers of BbSBP-4 sequences extracted from GenBank are (01 through 12): AB569303, AB569301, AB569300, AB594813, AB569302, AB617639, AB617641, AB571871, AB586125, AB594814, AF486506 and AF486507, respectively. Accession numbers of sequences generated in this study are (13 through 22): KF626632, KF626638, KF626636, KF626631, KF626629, KF626637, KF626634, KF626635, KF626630, KF626633