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Fig. 3 | BMC Veterinary Research

Fig. 3

From: Detection of rabbit Haemorrhagic disease virus 2 during the wild rabbit (Oryctolagus cuniculus) eradication from the Berlengas archipelago, Portugal

Fig. 3

Maximum Likelihood (ML) phylogenetic tree of the RHDV2 vp60 complete nucleotide sequences from the Berlenga island (2016) and others originated in Portugal mainland, Azores, Spain, France, Italy and Malta, available in Genbank. Bootstrap values (BS) are shown next to the nodes if equal or greater than 70. Sequence KC345614 (not displayed) was chosen as outgroup to root the tree. In the left side tree, the major groups are collapsed to facilitate visualization. a-HE800531, HE819400; b-JX106023, KC345611–12; c-HE800529, HE800530, HE800532 and FR819781; d-JQ929052, KC907712 and JX106022; e-KM87868; f-KP129395; g-KM979445; h-KM115675–76; i-KM115712–13; j-KT000295, KT000303, KT000308, KT000311, KT000316–319, KT000322–325 KT000327, KT000329–330, KT000332–333, KT000336, KT000339 and KT000341–343; k-KX132812 and KX132813; l-KM115684–5; m-KP129396; n-KJ957809 and KJ957810; o-KC741409; p-KP129397 and KP129399. “M-o-Novo” refers to the municipality of Montemor-o-Novo. A close-up of the RHDV2 strains more closely related with the strains from the Berlenga Island is shown in the right side of the figure

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