Microorganism | Sequence 5′ – 3′ | Product size (bp) | Annealing temperature (°C) | Reference |
---|---|---|---|---|
Total bacteria F | CGGCAACGAGCGCAACCC | 145 | 55 | [18] |
Total bacteria R | CCATTGTAGCACGTGTGTAGCC | |||
Total protozoa F | CTTGCCCTCYAATCGTWCT | 223 | 55 | [19] |
Total protozoa R | GCTTTCGWTGGTAGTGTATT | |||
Methanogens (mcrA)-F | TTCGGTGGATCDCARAGRGC | 140 | 55 | [20] |
Methanogens (mcrA)-R | GBARGTCGWAWCCGTAGAATCC | |||
Fibrobacter succinogenes | GTTCGGAATTACTGGGCGTAAA | 122 | 55 | [21] |
Fibrobacter succinogenes | CGCCTGCCCCTGAACTATC | |||
Ruminococcus albus | CCCTAA AAGCAGTCTTAGTTCG | 170 | 55 | [18] |
Ruminococcus albus | CCTCCTTGCGGTTAGAACA | |||
Ruminococcus flavefaciens F (Rf154f) | TCTGGAAACGGATGGTA | 259 | 55 | [18] |
Ruminococcus flavefaciens (Rf425r) | CCTTTAAGACAGGAGTTTACAA |