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Table 2 Cattle identification, sample types and 24-locus variable number of tandem repeat profiles of M. tuberculosis strains isolated in the Eastern Province of South Africa

From: Mycobacterium tuberculosis infection in cattle from the Eastern Cape Province of South Africa

Locus name MIRU 04 MIRU 26 MIRU 40 MIRU 10 MIRU 16 MIRU 31 VNTR 42 VNTR 43 ETR A VNTR 47 VNTR 52 VNTR 53 QUB 11b VNTR 1955 QUB 26 MIRU 02 MIRU 23 MIRU 39 MIRU 20 MIRU 24 MIRU 27 VNTR 46 VNTR 48 VNTR 49 Animal ID Sample type Farm
Copy number 3 8 3 3 4 5 1 2 n/a 2 4 n/a 2 4 8 2 5 3 n/a 1 3 3 2 3 25545
(TB 7000)
Lung Farm 1
3 5 1 3 1 5 1 4 2 1 3 2 4 3 n/a 2 6 2 n/a 1 2 3 1 3 84750367
(TB 7046A)
Prescapsular LN Farm 2
  1. n/a not available (PCR was not successful), LN Lymph node