From: The whole genomic analysis of orf virus strain HN3/12 isolated from Henan province, central China
Isolate | Species of origin | Country of origin | No. predicted genes | Genome size(bp) | ITR size (bp) | Genome G + C (%) | Genbank accession. no. | % ID (nt) | % ID (aa) | References |
---|---|---|---|---|---|---|---|---|---|---|
HN3/12 | Sheep | China (HN) | 132 | 136,643 | 2794 | 63.7 | KY053526 | 100 | 100 | In this study |
NA1/11 | Sheep | China (JL) | 132 | 137,080 | 3020 | 63.6 | KF234407 | 99 | 98 | Li et al.,2014 [22] |
GO | Goat | China (FJ) | 132 | 139,886 | 3964 | 63.6 | KP010354 | 97 | 95 | Chi et al.,2015 [15] |
YX | Goat | China (FJ) | 132 | 138,231 | 3446 | 63.8 | KP010353 | 97 | 95 | Chi et al.,2015 [15] |
SJ1 | Goat | China (FJ) | 129 | 139,112 | 4153 | 63.6 | KP010356 | 97 | 96 | Chi et al.,2015 [15] |
NP | Goat | China (FJ) | 124 | 132,111 | 2426 | 63.8 | KP010355 | 98 | 94 | Chi et al.,2015 [15] |
SA00 | Goat | USA | 132 | 139,962 | 3936 | 63.4 | AY386264 | 98 | 93 | Delhon et al.,2004 [20] |
IA82 | Sheep | USA | 132 | 137,241 | 3092 | 64.3 | AY386263 | 98 | 96 | Delhon et al.,2004 [20] |
NZ2 | Sheep | New Zealand | 132 | 137,820 | 3389 | 64.3 | DQ184476 | 98 | 97 | Mercer et al.,2006 [21] |
D1701 | Sheep | Germany | 288 | 134,038 | HM133903 | 97 | 94 | McGuire et al.,2012 [24] |