No | Gene symbol | Function | Primer name | Primer sequence (5′ ➔ 3′) | Product size (kb) | References |
---|---|---|---|---|---|---|
1 | exbB | Energy transport for iron acquisition | exbB-F exbB-R | TTGGCTTGTGATTGAACGC TGCAGGAATGGCGACTAAA | 283 | [18] |
2 | exbD | Energy transport for iron acquisition | exbD-F exbD-R | CGTTCTGATTACAGCCTCTT AACGAAATCTTGGAAACTGG | 247 | [18] |
3 | fimA | Adherence and colonization | fimA-F fimA-R | CCATCGGATCTAAACGACCTA AGTATTAGTTCCTGCGGGTG | 806 | [18] |
4 | fur | Iron-dependent regulation | fur-F fur-R | GTTTACCGTGTATTAGACCA CATTACTACATTTGCCATAC | 244 | [18] |
5 | hgbA | Iron acquisition | hgbA-F hgbA-R | TCAACGGCAGATAATCAGGG GCGGGAATGCTGAAGATAAG | 268 | [18] |
6 | hgbB | Iron acquisition | hgbB-F hgbB-R | ACCGCGTTGGAATTATGATTG CATTGAGTACGGCTTGACAT | 768 | [33] |
7 | hsf1 | Adherence and colonization | hsf1-F hsf1-R | TTGAGTCGGCTGTAGAGTTCG ACTCTTTAGCAGTGGGGACAACCTC | 654 | [18] |
8 | hsf2 | Adherence and colonization | hsf2-F hsf2-R | ACCGCAACCATGCTCTTAC TGACTGACATCGGCGGTAC | 430 | [18] |
9 | nanB | Nutrition acquisition | nanB-F nanB-R | GTCCTATAAAGTGACGCCGA ACAGCAAAGGAAGACTGTCC | 586 | [33] |
10 | nanH | Nutrition acquisition | nanH-F nanH-R | GTGGGAACGGGAATTGTGA ACATGCCAAGTTTGCCCTA | 287 | [18] |
11 | oma87 | Outer membrane protein assembly and insertion | oma87-F oma87-R | GGCAGCGAGCAACAGATAACG TGTTCGTCAAATGTCGGGTGA | 833 | [18] |
12 | ompA | Outer membrane biosynthesis and integrity | ompA-F ompA-R | CGCATAGCACTCAAGTTTCTCC CATAAACAGATTGACCGAAACG | 202 | [18] |
13 | ompH | Outer membrane general transport | ompH-F ompH-R | CGCGTATGAAGGTTTAGGT TTTAGATTGTGCGTAGTCAAC | 452 | |
14 | pfhA | Adherence and colonization | pfhA-F pfhA-R | AGCTGATCAAGTGGTGAAC TGGTACATTGGTGAATGCTG | 256 | [33] |
15 | plpB | Amino acid transport | plpB-F plpB-R | TTTGGTGGTGCGTATGTCTTCT AGTCACTTTAGATTGTGCGTAG | 531 | [18] |
16 | pmHAS | Capsule biosynthesis | pmHAS-F pmHAS-R | TCAATGTTTGCGATAGTCCGTTAG TGGCGAATGATCGGTGATAGA | 430 | [18] |
17 | psl | Outer membrane biosynthesis and integrity | psl-F psl-R | TCTGGATCCATGAAAAAACTAACTAAAGTA AAGGATCCTTAGTATGCTAACACAGGACGACG | 400 | [33] |
18 | ptfA | Adherence and colonization | ptfA-F ptfA-R | TGTGGAATTCAGCATTTTAGTGTGTC TCATGAATTCTTATGCGCAAAATCCT GCTGG | 500 | |
19 | sodA | Detoxification of radicals | sodA-F soda-R | TACCAGAATTAGGCTACGC GAAACGGGTTGCTGCCGCT | 263 | [33] |
20 | sodC | Detoxification of radicals | sodC-F sodC-R | AGTTAGTAGCGGGGTTGGCA TGGTGCTGGGTGATCATCATG | 237 | [33] |
21 | tadD | Adherence and colonization | tadD-F tadD-R | TCTACCCATTCTCAGCAAGGC ATCATTTCGGGCATTCACC | 418 | [18] |
22 | tbpA | Iron acquisition | tbpA-F tbpA-R | TGCGACAACGGAAATTTCCTC GGACAGTGCATATAACTTGTTTACTA | 808 | [33] |
23 | tonB | Energy transport for iron acquisition | tonB-F tonB-R | CGACGGTGAAACCTGAGCCA CCGAGCGATAAGCATTGACT | 261 | [18] |
24 | toxA | Exotoxin | toxA-F toxA-R | CTTAGATGAGCGACAAGGTT GGAATGCCACACCTCTATA | 864 | [33] |
25 | plpE | Highly immunogenic outer membrane lipoprotein | plpE-F plpE-R | CCATGGGCATGAAACAAATCGTTTTAAA CTCGAGTTGTGCTTGGTGACTTTTTTC | 1010 | [27] |