Fig. 4
From: Evolutionary phylodynamics of foot-and-mouth disease virus serotypes O and A circulating in Vietnam
Deduced amino acid sequences of the VP1 proteins (aa 1-100) of the type O FMDVs in this study. Only sequences different from the consensus are shown. Strains with similar profiles of the antigenic site are grouped together. Similar amino acid sequences of the two reference trains, the O/MYA/2/2000 strain (for the SEA group) and the O/A/CHA/58 strain (for the ME-SA group), are shadowed. The VP1 antigenic sites are at amino acid position 43, 44, 45, 144, 148, 149, 154, and 208. The “n” represents the strains with similar profiles to the antigenic site