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Table 3 Identification and relative quantification of chosen proteins in terms of Peptide Spectrum Matches for all three runs

From: A proteomic approach to the development of DIVA ELISA distinguishing pigs infected with Salmonella Typhimurium and pigs vaccinated with a Salmonella Typhimurium-based inactivated vaccine

Protein name Accession number PSMs (peptide spectrum matches)
Control Post-infection Post-vaccination
Cell invasion protein SipB Q56019 3, 0, 22 29, 20, 27 13, 7, 25
Cell invasion protein SipC P0CL47 5, 1, 22 30, 33, 31 7, 18, 26
D-methionine-binding lipoprotein MetQ Q8ZRN1 3, 1, 0 12, 5, 11 0, 0, 9
Periplasmic oligopeptide-binding protein OppA P06202 7, 0, 0 31, 0, 0 25, 16, 14
Outer membrane protein assembly factor BamB H9L451 0, 2, 0 0, 0, 7 7, 10, 0
Chaperone SurA Q7CR87 1, 5, 1 2, 0, 21 21, 15, 15
Cell invasion protein SipD Q56026 7, 3, 0 4, 15, 0 4, 14, 1
Secreted effector protein SseB Q7BVH7 0, 0, 0 2, 0, 0 1, 0, 1
Protein PrgI P41784 0, 2, 0 1, 2, 0 2, 0, 1
Flagellin FliC P06179 3, 22, 17 23, 29, 26 19, 17, 63