Table 1 Sequences and properties of peptides used in this study
From: Tissue expression and antibacterial activity of host defense peptides in chicken
Name | Length (aa) | Composition | Mw (g/mol) | Net charge | Hydrophobic ratio |
|---|---|---|---|---|---|
AvBD1 | 40 | GRKSDCFRKSGFCAFLKCPSLTLISGKCSRFYLCCKRIWG | 4567.55 | 7.7 | 32 |
AvBD2 | 39 | RDMLFCKGGSCHFGGCPSHLIKVGSCFGFRSCCKWPWNA | 4324.14 | 3.9 | 36 |
AvBD3 | 36 | TATQCRIRGGFCRVGSCRFPHIAIGKCATFISCCGR | 3877.62 | 5.8 | 33 |
AvBD4 | 37 | RYHMQCGYRGTFCTPGKCPYGNAYLGLCRPKYSCCRW | 4341.08 | 5.8 | 24 |
AvBD5 | 37 | GLPQDCERRGGFCSHKSCPPGIGRIGLCSKEDFCCRS | 4000.59 | 1.8 | 24 |
AvBD6 | 38 | SPIHACRYQRGVCIPGPCRWPYYRVGSCGSGLKSCCVR | 4216.96 | 5.8 | 32 |
AvBD7 | 37 | RPIDTCRLRNGLCFPGICRRPYYWIGTCNNGIGSCCAR | 4307.05 | 4.7 | 32 |
AvBD8 | 41 | NNEAQCEQAGGICSKDHCFHLHTRAFGHCQRGVPCCRTVYD | 4593.16 | 0.1 | 24 |
AvBD9 | 42 | ADTLACRQSMGSCSFVACRAPSVDIGTCRGGKLKCCKWAPSS | 4353.13 | 3.7 | 36 |
AvBD10 | 42 | PDTVACRTQGNFCRAGACPPTFTISGQCHGGLLNCCAKIPAQ | 4309.01 | 1.8 | 38 |
AvBD11 | 39 | RDTSRCVGYHGYCIRSKVCPKPFAAFGTCSWRQKTCCVD | 4431.14 | 4.8 | 28 |
AvBD12 | 44 | PDSCNHDRGLCRVGNCNPGEYLAKYCFEPVILLCCKPLSPTPTKT | 4841.64 | 0.8 | 36 |
AvBD13 | 37 | SDSQLCRNNHGHCRRLCFHMESWAGSCMNGRLRCCRF | 4373.03 | 4 | 24 |
AvBD14 | 37 | DTVTCRKMKGKCSFLLCPFFKRSSGTCYNGLAKCCRP | 4151 | 6.7 | 30 |
CATH1 | 28 | PVRVKRVWPLVIRTVIAGYNLYRAIKKK | 3338.14 | 8 | 53 |
CATB1 | 40 | PIRNWWIRIWEWLNGIRKRLRQRSPFYVRGHLNVTSTPQP | 5028.86 | 7.1 | 45 |
CATH2 | 34 | PVLVQRGRFGRFLRKIRRFRPKVTITIQGSARFG | 4014.84 | 10 | 44 |
CATH3 | 31 | PVRVKRFWPLVPVAINTVAAGINLYKAIRRK | 3547.35 | 7 | 61 |
cNK3 | 30 | PDEDAINNALNKVCSTGRRQRSICKQLLKK | 3399.95 | 3.9 | 30 |