Table 1 BAC clones from CHORI-82 dog library selected to represent 20 cancer-related genes for FISH analysis. Chromosome locations based on the CanFam2 genome assembly are noted
From: Comprehensive genomic characterization of five canine lymphoid tumor cell lines
Gene | BAC clone | Chromosome | Start (bp) | Stop (bp) |
|---|---|---|---|---|
BCL11B | 326-K01 | 8 | 70,661,395 | 70,752,579 |
IGH | 027-N17 | 8 | 75,997,304 | 76,191,846 |
VEGFA | 152-L05 | 12 | 15,212,673 | 15,228,610 |
CCNC | 268-D08 | 12 | 60,739,913 | 60,764,849 |
FOXO3A | 048-I05 | 12 | 68,583,078 | 68,701,688 |
CDKN2A | 325-C12 | 11 | 44,255,629 | 44,256,009 |
MYC | 335-M01 | 13 | 28,238,008 | 28,242,545 |
KIT | 98-B16 | 13 | 50,017,518 | 50,212,194 |
CDK6 | 181-D14 | 14 | 21,147,772 | 21,367,160 |
EZH2 | 300-P18 | 16 | 4,905,169 | 4,971,032 |
MYCBP2 | 216-G13 | 22 | 33,561,172 | 33,820,510 |
FLT3 | 062-D23 | 25 | 14,581,755 | 14,658,045 |
PTEN | 521-G14 | 26 | 40,921,802 | 40,981,821 |
HEY1 | 484-E08 | 29 | 30,184,049 | 30,186,972 |
E2F5 | 157-A19 | 29 | 34,748,851 | 34,758,529 |
NFKB2 | 001-D14 | 28 | 17,903,193 | 17,910,910 |
ERG | 100-F17 | 31 | 35,578,420 | 35,760,306 |
MLLT2 | 468-E14 | 32 | 13,354,180 | 13,586,952 |
CD83 | 127-B24 | 35 | 16,354,899 | 16,533,175 |
DEK | 517-A02 | 35 | 20,035,294 | 20,172,093 |