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Table 3 The list of differentially regulated genes with known ontology in AD vs healthy dogs

From: Lymphocytic, cytokine and transcriptomic profiles in peripheral blood of dogs with atopic dermatitis

GeneSymbol

Description

logFC

Regulation

p-value adj.

NPTXR

neuronal pentraxin receptor

−1,09

down

0,085

CCDC54

coiled-coil domain containing 54

−1,09

down

0,085

UFL1

UFM1-specific ligase 1

−0,76

down

0,085

BBS2

Bardet-Biedl syndrome 2

−0,68

down

0,085

DCUN1D1

defective in cullin neddylation 1, domain containing 1

−0,66

down

0,085

RORA

RAR-related orphan receptor A

−0,66

down

0,085

PKIB

protein kinase (cAMP-dependent, catalytic) inhibitor beta

−0,61

down

0,085

OPN1SW

opsin 1 (cone pigments), short-wave-sensitive

−0,58

down

0,085

FAM49A

family with sequence similarity 49, member A

−0,58

down

0,085

PURA

purine-rich element binding protein A

−0,57

down

0,085

CA14

carbonic anhydrase 14-like (LOC100855809),

−0,54

down

0,085

SCN1B

sodium channel, voltage-gated, type I, beta subunit

−0,53

down

0,085

SCOC

short coiled-coil protein

−0,53

down

0,085

PIWIL4

PIWIL4 piwi-like RNA-mediated gene silencing 4

−0,53

down

0,085

WNT5B

wingless-type MMTV integration site family, member 5B

−0,53

down

0,085

FAM155B

family with sequence similarity 155, member B

−0,52

down

0,085

EPHB3

EPH receptor B3

−0,52

down

0,085

LOC100856122

olfactory receptor 4 K5-like

−0,52

down

0,085

BPIFB1

BPI fold containing family B, member 1

−0,52

down

0,085

TNKS2

tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2

−0,51

down

0,085

RTN4RL1

reticulon 4 receptor-like 1

−0,51

down

0,085

TTYH2

tweety family member 2

−0,50

down

0,085

AK9

adenylate kinase 9

−0,50

down

0,085

GPR12

G protein-coupled receptor 124

−0,49

down

0,085

PCIA1

cross-immune reaction antigen

−0,49

down

0,085

VEGFA

vascular endothelial growth factor A

−0,49

down

0,085

OTOP1

otopetrin 1

−0,49

down

0,085

TTF2

transcription termination factor, RNA polymerase II

−0,49

down

0,085

FGFBP3

fibroblast growth factor binding protein 3

−0,48

down

0,085

ABHD15

abhydrolase domain containing 15

−0,48

down

0,085

PROC

protein C (inactivator of coagulation factors Va and VIIIa)

−0,47

down

0,085

EM2

transmembrane protein 25

−0,47

down

0,085

EMC1

ER membrane protein complex subunit 1

−0,47

down

0,085

TMEM52

transmembrane protein 52

−0,47

down

0,085

RHOV

ras homolog family member V

−0,47

down

0,085

TEKT1

tektin 1

−0,47

down

0,085

GDPD3

glycerophosphodiester phosphodiesterase domain containing 3

−0,47

down

0,085

ANAPC5

anaphase promoting complex subunit 5 [

−0,47

down

0,085

ABCA4

ATP-binding cassette, sub-family A (ABC1), member 4

−0,46

down

0,085

ZC3H10

zinc finger CCCH-type containing 10

−0,46

down

0,085

SMAD2

SMAD family member 2

−0,46

down

0,085

SSH3

slingshot protein phosphatase 3

−0,46

down

0,085

SH2B1

SH2B adaptor protein 1

−0,45

down

0,085

PIAS1

protein inhibitor of activated STAT, 1

−0,45

down

0,085

SUFU

suppressor of fused homolog (Drosophila)

−0,44

down

0,085

ALKBH4

alkB, alkylation repair homolog 4 (E. coli) A

−0,44

down

0,085

NRG2

neuregulin 2

−0,44

down

0,085

TMEM231

transmembrane protein 231

−0,44

down

0,085

OGT

OGT O-linked N-acetylglucosamine (GlcNAc) transferase

−0,44

down

0,085

RBM25

RNA binding motif protein 25

−0,43

down

0,085

SCN2B

sodium channel, voltage-gated, type II, beta subunit

−0,42

down

0,085

PTP4A2

protein tyrosine phosphatase type IVA, member 2

−0,42

down

0,085

PEX26

peroxisomal biogenesis factor 2

−0,41

down

0,085

EIF4ENIF1

eukaryotic translation initiation factor 4E nuclear import factor 1

−0,40

down

0,085

THEMIS

thymocyte selection associated

−0,39

down

0,085

ERLIN1

ER lipid raft associated 1

−0,39

down

0,085

DDX1

DEAD (Asp-Glu-Ala-Asp) box helicase 1

−0,39

down

0,085

PABPC5

poly(A) binding protein, cytoplasmic 5

−0,37

down

0,085

CDT1

chromatin licensing and DNA replication factor 1

−0,34

down

0,085

  1. Log fold change (FC) expressed as log2
  2. p-value adj. was adjusted by multiple testing using the Benjamini-Hochberg False discovery rate procedure (FDR) for each comparison