Molecular identification of Mycobacterium bovis from cattle and human host in Mali: expanded genetic diversity

BMC Veterinary Research

Table 4 Spoligotype patterns revealed during the study in Mali and their frequency

SB number	Frequency	Percent	Pattern	Region
SB2262^a	2	10.52	1101101101111100111101111111101111111100000	Bamako
SB2263^a	3	15.78	1101101101111110111101111111101101111100000	Bamako
SB2264^a	1	5.26	1101101101111110111111111111101011111100000	Bamako
SB0300	6	31.57	1101101101111110111111111111101111111100000	Kayes, Bamako, Ségou, Mopti
SB1275	1	5.26	1101111101111110111101111111101111111100000	Sikasso
SBXXXX	1	5.26	1100011101111110111110011111101111111100000	Mopti
SBXXXX	2	10.52	1101101101111110111111111111101011111100000	Bamako
SB0944	3	15.78	1101111101111110111111111111101111111100000	Sikasso
Total	19	100

^aThree new patterns have been identified, SB2262, SB2263 and SB2264 and are found only in Bamako. The SB1275 and SB0944 are found in Sikasso. In contrast, the SB0300 is found in all sites except Sikasso. The frequency of the SB2262 pattern is more frequent in Bamako with 36.84 % followed by the SB0300 pattern with 31.57 % in the four of the five study sites

ISSN: 1746-6148