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Table 4 Spoligotype patterns revealed during the study in Mali and their frequency

From: Molecular identification of Mycobacterium bovis from cattle and human host in Mali: expanded genetic diversity

SB number Frequency Percent Pattern Region
SB2262a 2 10.52 1101101101111100111101111111101111111100000 Bamako
SB2263a 3 15.78 1101101101111110111101111111101101111100000 Bamako
SB2264a 1 5.26 1101101101111110111111111111101011111100000 Bamako
SB0300 6 31.57 1101101101111110111111111111101111111100000 Kayes, Bamako, Ségou, Mopti
SB1275 1 5.26 1101111101111110111101111111101111111100000 Sikasso
SBXXXX 1 5.26 1100011101111110111110011111101111111100000 Mopti
SBXXXX 2 10.52 1101101101111110111111111111101011111100000 Bamako
SB0944 3 15.78 1101111101111110111111111111101111111100000 Sikasso
Total 19 100  
  1. aThree new patterns have been identified, SB2262, SB2263 and SB2264 and are found only in Bamako. The SB1275 and SB0944 are found in Sikasso. In contrast, the SB0300 is found in all sites except Sikasso. The frequency of the SB2262 pattern is more frequent in Bamako with 36.84 % followed by the SB0300 pattern with 31.57 % in the four of the five study sites