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Table 1 Identification of ssDNA aptamers

From: Characterization of DNA aptamers generated against the soft-shelled turtle iridovirus with antiviral effects

Aptamer

Central randomized sequences

Frequency

QA-92

CGGGTGCCTTAAAGTGTAGGTGGGAGGGGGATGATTATGTACGATCAAGT

26 %

QA-9

GAAGGTGGAGCGGTTAGGATACTAGCGAATGAAGACACGTTAGCTGATCT

23 %

QA-12

AGTGGGTAAGGTCTGGTGGATTGTGGACGGGGGGCGGGGCAGTGGCTTGA

21 %

QA-36

TGTGCGGGGGAGGGGAGTGGCGCTGTTGGTGCGGGTATAGCGCGTGGTGT

18 %

QA-17

AGAGGGTCGGTCGTAGTGGATTTGGCGCATTGTTCTGCGGGGTGGGAGGG

2 %

QA-79

GTCGGGACAGTGTTGGTCCTCAGGATCTCTGGGGCGCGGGGTTAAACAGT

2 %

QA-41

TGTTCGGGTTATTGCTCCTCCTTATTGTCACCTGGATGTATGATCGTGTAG

4 %

QA-88

GGATAGGGGGCTCGCTCGTTCCGTAGCGATGCAGGTTTCTTATTCACGAA

2 %

Consensus

-GG---------G-----T-

 
  1. Frequency indicates the percentage of the 8th selected pool comprised by each aptamer. Consensus regions within the representative aptamers are bold