Table 4 Bacterial strains and codes. Taxonomy, collection codes and accession numbers from NCBI GenBank of the bacterial strains used in this study
Strain | Species | Host/source | Geographic origin | Sequence code |
|---|---|---|---|---|
ET883 | E. piscicida | European eel (Anguilla anguilla) | Greaker, Norway (1989) | NR125649 |
RM 298.1 | E. piscicida | Turbot (Scophthalmus maximus) | Southern Europe (2006) | KC138730 |
HL 9.1 | E. piscicida | Turbot (Scophthalmus maximus) | Northern Europe (2006) | KC138727 |
ETA1 | E. piscicida | Turbot (Scophthalmus maximus) | Scotland, UK (2007) | KC138724 |
ETK01 | E. piscicida | Korean catfish (Silurus asotus) | Jeollabukdo, South Korea (2008) | KC138726 |
NCIMB 2056 | E. piscicida | Sea bream (Evynnis japonicas) | NCIMB collection | KC138729 |
LTB4 | E. tarda | Turbot (Scophthalmus maximus) | Qingdao, China (2006) | EU259315 |
NCIMB 2034 | E. tarda | Unknown fish spp. | NCIMB collection | KC138728 |
ET080813 | E. tarda | Marbled eel (Anguilla marmorata) | Qingdao, China (2008) | CP006664 |
ET080814 | E. tarda | Japanese eel (Anguilla japonica) | Qingdao, China (2008) | KC138723 |
ATCC 15947T | E. tarda | Human faeces | Kentucky, USA (1959) | NR024770 |
ATCC 23685 | E. tarda | Human faeces | 294638553 | |
AL93 | E. ictaluri | Channel catfish (Ictalurus punctatus) | USA | KC138721 |
ATCC 33202T | E. ictaluri | Channel catfish (Ictalurus punctatus) | Georgia, USA (1976) | NR024769 |
LH51 | E. ictaluri | Channel catfish (Ictalurus punctatus) | Liaoning, China | EU541494 |
93–146 | E. ictaluri | Channel catfish (Ictalurus punctatus) | USA | CP001600.2 |
ATCC 33379T | E. hoshinae | Female puffin (Fratercula arctica) | France | AB682272 |
EtS1 | Edwardsiella sp. | Sharpsnout sea bream (Diplodus puntazzo) | Greece (2013) | KP729431 |
EtS2 | Edwardsiella sp. | Sharpsnout sea bream (Diplodus puntazzo) | Greece (2014) | KP729432 |
2457T | Shigella flexneri | AE014073 | ||
568 | Serratia proteamaculans | NR074820 |