Table 3 Location of the Variable Number of Tandem Repeats in the genome of F. psychrophilum JIP02/86
VNTR | Repeat sequence | Location |
|---|---|---|
FpVNTR1 | AATAGGC | Intergenic |
FpVNTR2 | AAAGTTT | Intergenic |
FpVNTR3 | AAATCTA | Intergenic |
FpVNTR4 | AATTCAT | Intergenic |
FpVNTR5 | TTAGGCA | Intergenic |
FpVNTR6 | TTTCTAAT | Intergenic |
FpVNTR7 | TTAAAAA | Intergenic |
FpVNTR8 | AATCTGA | Intergenic |
FpVNTR9 | GTTT | Intergenic |
FpVNTR10 | CTTTTACTT | Intragenic/gene for gliding motility protein GldL |
FpVNTR12 | ATTTTAG | Intergenic and intragenic |
FpVNTR13 | AATCCACA | Intergenic and intragenic |