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Table 1 Equine specific primers used for quantitative real-time reverse transcriptase PCR

From: mRNA expression of genes involved in inflammation and haemostasis in equine fibroblast-like synoviocytes following exposure to lipopolysaccharide, fibrinogen and thrombin

Primer

Primer sequence (5′ → 3′)

Product

NCBI source/

name

Forward/reverse

size

Reference

SAA

CCT GGG CTG CTA AAG TCA TC/

169 bp

AF240364.1

 

AGG CCA TGA GGT CTG AAG TG

  

IL-6

ATG GCA GAA AAA GAC GGA TG/

220 bp

[72]

 

GGG TCA GGG GTG GTT ACT TC

  

MCP-1

ATT GGC CAA GGA GAT CTG TG/

166 bp

EU779497.1

 

ATA TCA GGG GGC ATT TAG GG

  

TF

TGC ACT AGC CAA CAC AAA GC/

101 bp

XM_001491449.2

 

CAG AGA CAC AGC CAG GAT GA

  

uPA

ATG TAT GGT GAT GCC CGT TT/

175 bp

XM_001502951.3

 

CAC AGC ATT TTG GTG GTG AC

  

PAI-1

AAG GGT CCG CTT CCT ACA AT/

204 bp

XM_001492517.3

 

TTG AAC TGC ATT GCC TCT TG

  

VEGF

CAA CGA CGA GGG CCT AGA GT/

100 bp

[73]

 

CAT CTC TCC TAT GTG TGG CTT TG

  

PAR1

TTC GTG ATA AGC CTG CCT CT/

212 bp

XM_001503957.2

 

GTA AAA CGC TGC AGT GAC GA

  

GAPDH

GGG TGG AGC CAA AAG GGT CAT CAT/

417 bp

[74]

 

AGC TTT CTC CAG GCG GCA GGT CAG

  
  1. Primers used to amplify specific genes in LPS, fibrinogen, thrombin and non-treated equine fibroblast-like synoviocytes: SAA: serum amyloid A. IL-6: interleukin-6. MCP-1: monocyte chemotactic protein-1. TF: tissue factor. uPA: urokinase plasminogen activator. PAI-1: plasminogen activator inhibitor-1. VEGF: vascular endothelial growth factor. PAR-1: protease activator receptor-1. GAPDH: gluceraldehyde‐3‐phosphate dehydrogenase