Table 2 Molecular differentiation of isolates by MIRU-VNTR
From: Evaluation of MIRU-VNTR for typing of Mycobacterium bovis isolated from Sika deer in Northeast China
MIRU-VNTR type | MIRU-VNTR allelic profile | Isolates ID | Number of Isolates(N) | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ETRA | MIRU4 | QUB11b | Mtub4 | MIRU2 | MIRU23 | MIRU31 | MIRU39 | MIRU40 | QUB26 | Mtub21 | MIRU27 | Mtub30 | Mtub34 | MIRU16 | |||
M-V01 | 1 | 1 | 1 | 7 | 3 | 5 | 7 | 10 | 2 | 5 | 1 | 2 | 2 | 7 | 5 | ShuangYang1-5 | 5 |
M-V02 | 7 | 3 | 1 | 7 | 5 | 5 | 7 | 10 | 2 | 5 | 1 | 2 | 5 | 7 | 3 | ShuangYang6-14 | 9 |
M-V03 | 1 | 3 | 4 | 5 | 5 | 4 | 8 | 10 | 5 | 6 | 1 | 3 | 5 | 7 | 3 | ShuangYang15-21 | 7 |
M-V04 | 6 | 4 | 6 | 7 | 5 | 5 | 7 | 10 | 5 | 4 | 5 | 4 | 5 | 7 | 3 | ShuangYang22-27; LiaoYuan1-6; TongHua1-5 | 17 |
M-V05 | 1 | 1 | 7 | 7 | 5 | 5 | 7 | 6 | 2 | 5 | 4 | 3 | 5 | 7 | 3 | TongHua6-13 | 8 |
M-V06 | 6 | 3 | 4 | 3 | 5 | 4 | 8 | 6 | 2 | 4 | 4 | 3 | 5 | 7 | 3 | TongHua14-28 | 15 |
M-V07 | 6 | 4 | 6 | 3 | 5 | 5 | 7 | 6 | 2 | 5 | 1 | 3 | 5 | 7 | 3 | TongHua29-32; SiPing1-5 | 9 |
M-V08 | 7 | 4 | 1 | 3 | 3 | 4 | 7 | 10 | 5 | 5 | 1 | 3 | 5 | 7 | 3 | SiPing6-9; ShuangYang28-36 | 13 |
M-V09 | 1 | 1 | 1 | 3 | 5 | 5 | 7 | 10 | 5 | 5 | 5 | 3 | 5 | 7 | 3 | ShuangYang37-39 | 3 |
M-V10 | 6 | 4 | 7 | 8 | 5 | 5 | 8 | 10 | 5 | 4 | 1 | 4 | 2 | 2 | 4 | ShuangYang40-42; SongYuan1, SongYuan2 | 5 |
M-V11 | 6 | 4 | 7 | 7 | 5 | 5 | 8 | 10 | 5 | 6 | 1 | 4 | 2 | 7 | 5 | SongYuan3-5; ShuangYang43 | 4 |
M-V12 | 7 | 3 | 7 | 8 | 3 | 5 | 8 | 10 | 2 | 6 | 1 | 4 | 2 | 2 | 5 | SiPing10 | 1 |