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Table 1 Diagnostic sensitivity and specificity of the CaPV LAMP assay as tested against representative strains of CaPV

From: Detection of capripoxvirus DNA using a novel loop-mediated isothermal amplification assay

Virus Isolate name LAMP result (Tp)a PCR result (Ct)b
GTPV Yemen 31.89 20.98
GTPV Turkey 23.89 20.77
GTPV Saudi Arabia 33.62 17.67
GTPV Oman 27.17 22.96
GTPV Mongolia 22.25 20.27
GTPV India 22.65 19.44
GTPV Held 29.81 24.01
GTPV Gorgan (Iran) 34.34 21.97
GTPV Ghana 38.10 26.05
GTPV China 44.54 36.42
GTPV Bangladesh 32.27 21.74
GTPV Abu Ghraib (Iraq) 27.27 17.29
GTPV Kano (Nigeria) 23.57 21.47
GTPV Morocco 33.59 21.35
GTPV Pakistan 44.96 40.28
GTPV Vietnam 28.96 22.95
SP/GTPV Kenya 29.62 18.22
SP/GTPV Saudi Arabia 37.84 21.39
SP/GTPV Nigeria 42.30 27.98
SP/GTPV Yemen 29.56 22.75
SP/GTPV KS-1 36.77 22.60
SPPV Romania 37.14 24.78
SPPV Abu Ghraib (Iraq) 34.91 21.84
SPPV Isiolo (Kenya) 27.66 23.84
SPPV Kedong (China) 24.83 21.75
SPPV Mongolia 29.54 17.65
SPPV Nigeria 36.19 29.03
SPPV Oman 26.91 19.63
SPPV Pakistan 38.79 22.60
SPPV Senegal 40.02 21.71
SPPV Cyprus 58.85 34.38
SPPV India 41.68 23.52
SPPV Sudan 32.35 21.03
SPPV Vaccine Strain Saudi Arabia 38.05 22.89
SPPV Vaccine Strain Stavropol (Russia) 37.61 20.79
SPPV Vaccine Strain France 38.33 21.62
SPPV Vaccine Strain Pendik (Turkey) 36.38 22.27
LSDV Israel 27.75 20.96
LSDV Nigeria 30.16 21.82
LSDV Uganda 23.73 18.69
LSDV Senegal 29.22 23.26
LSDV Cameroon 31.49 21.50
LSDV Egypt 93 31.41 23.37
LSDV Egypt 2006 32.14 26.09
LSDV Neethling 26.98 19.59
LSDV Oman 32.19 32.19
LSDV Ghana 28.55 22.63
n/a Negative Cattle Blood (n = 14) Negative (n = 14) Negative (n = 14)
n/a Negative Sheep Blood (n = 8) Negative (n = 8) Negative (n = 8)
n/a Negative Cattle Skin (n = 16) Negative (n = 16) Negative (n = 16)
Buffalopox virus n/a Negative Not Tested
Camelpox virus n/a Negative Not Tested
Cheetah poxvirus n/a Negative Not Tested
Cowpox virus n/a Negative Not Tested
Orf virus n/a Negative Not Tested
Swine poxvirus n/a Negative Not Tested
  1. a T p  = Time to positive (minutes).
  2. b C t  = threshold cycle value.