TY - JOUR AU - O'Hara, A. M. AU - Shanahan, F. PY - 2006 DA - 2006// TI - The gut flora as a forgotten organ JO - Embo Reports VL - 7 UR - https://doi.org/10.1038/sj.embor.7400731 DO - 10.1038/sj.embor.7400731 ID - O'Hara2006 ER - TY - JOUR AU - Neish, A. S. PY - 2009 DA - 2009// TI - Microbes in Gastrointestinal Health and Disease JO - Gastroenterology VL - 136 UR - https://doi.org/10.1053/j.gastro.2008.10.080 DO - 10.1053/j.gastro.2008.10.080 ID - Neish2009 ER - TY - JOUR AU - Wardwell, L. H. AU - Huttenhower, C. AU - Garrett, W. S. PY - 2011 DA - 2011// TI - Current concepts of the intestinal microbiota and the pathogenesis of infection JO - Curr Infect Dis Rep VL - 13 UR - https://doi.org/10.1007/s11908-010-0147-7 DO - 10.1007/s11908-010-0147-7 ID - Wardwell2011 ER - TY - JOUR AU - Hintz, H. F. AU - Cymbaluk, N. F. PY - 1994 DA - 1994// TI - Nutrition of the Horse JO - Ann Rev Nutr VL - 14 UR - https://doi.org/10.1146/annurev.nu.14.070194.001331 DO - 10.1146/annurev.nu.14.070194.001331 ID - Hintz1994 ER - TY - JOUR AU - MacLean, D. AU - Jones, J. D. G. AU - Studholme, D. J. PY - 2009 DA - 2009// TI - Application of 'next-generation' sequencing technologies to microbial genetics JO - Nature Rev Microbiol VL - 7 ID - MacLean2009 ER - TY - JOUR AU - Muegge, B. D. AU - Kuczynski, J. AU - Knights, D. AU - Clemente, J. C. AU - Gonzalez, A. AU - Fontana, L. AU - Henrissat, B. AU - Knight, R. AU - Gordon, J. I. PY - 2011 DA - 2011// TI - Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans JO - Sci VL - 332 UR - https://doi.org/10.1126/science.1198719 DO - 10.1126/science.1198719 ID - Muegge2011 ER - TY - JOUR AU - Turnbaugh, P. J. AU - Hamady, M. AU - Yatsunenko, T. AU - Cantarel, B. L. AU - Duncan, A. AU - Ley, R. E. AU - Sogin, M. L. AU - Jones, W. J. AU - Roe, B. A. AU - Affourtit, J. P. PY - 2009 DA - 2009// TI - A core gut microbiome in obese and lean twins JO - Nature VL - 457 UR - https://doi.org/10.1038/nature07540 DO - 10.1038/nature07540 ID - Turnbaugh2009 ER - TY - JOUR AU - Serino, M. AU - Luche, E. AU - Chabo, C. AU - Amar, J. AU - Burcelin, R. PY - 2009 DA - 2009// TI - Intestinal microflora and metabolic diseases JO - Diabetes Metab VL - 35 UR - https://doi.org/10.1016/j.diabet.2009.03.003 DO - 10.1016/j.diabet.2009.03.003 ID - Serino2009 ER - TY - JOUR AU - Suchodolski, J. S. AU - Xenoulis, P. G. AU - Paddock, C. G. AU - Steiner, J. M. AU - Jergens, A. E. PY - 2010 DA - 2010// TI - Molecular analysis of the bacterial microbiota in duodenal biopsies from dogs with idiopathic inflammatory bowel disease JO - Vet Microbiol VL - 142 UR - https://doi.org/10.1016/j.vetmic.2009.11.002 DO - 10.1016/j.vetmic.2009.11.002 ID - Suchodolski2010 ER - TY - JOUR AU - Costa, M. C. AU - Arroyo, L. G. AU - Allen-Vercoe, E. AU - Stampfli, H. R. AU - Kim, P. K. AU - Sturgeon, A. AU - Weese, J. S. PY - 2012 DA - 2012// TI - Comparison of the fecal microbiota of healthy horses and horses with colitis by high throughput sequencing of the V3-V5 region of the 16S rRNA gene JO - Plos One VL - 7 ID - Costa2012 ER - TY - JOUR AU - Garrett, L. A. AU - Brown, R. AU - Poxton, I. R. PY - 2002 DA - 2002// TI - A comparative study of the intestinal microbiota of healthy horses and those suffering from equine grass sickness JO - Vet Microbiol VL - 87 UR - https://doi.org/10.1016/S0378-1135(02)00018-4 DO - 10.1016/S0378-1135(02)00018-4 ID - Garrett2002 ER - TY - JOUR AU - Milinovich, G. J. AU - Trott, D. J. AU - Burrell, P. C. AU - van Eps, A. W. AU - Thoefner, M. B. AU - Blackall, L. L. AU - Al Jassim, R. A. M. AU - Morton, J. M. AU - Pollitt, C. C. PY - 2006 DA - 2006// TI - Changes in equine hindgut bacterial populations during oligofructose-induced laminitis JO - Environ Microbiol VL - 8 UR - https://doi.org/10.1111/j.1462-2920.2005.00975.x DO - 10.1111/j.1462-2920.2005.00975.x ID - Milinovich2006 ER - TY - JOUR AU - Milinovich, G. J. AU - Trott, D. J. AU - Burrell, P. C. AU - Croser, E. L. AU - Al Jassim, R. A. M. AU - Morton, J. M. AU - van Eps, A. W. AU - Pollitt, C. C. PY - 2007 DA - 2007// TI - Fluorescence in situ hybridization analysis of hindgut bacteria associated with the development of equine laminitis JO - Environ Microbiol VL - 9 UR - https://doi.org/10.1111/j.1462-2920.2007.01327.x DO - 10.1111/j.1462-2920.2007.01327.x ID - Milinovich2007 ER - TY - JOUR AU - Milinovich, G. J. AU - Burrell, P. C. AU - Pollitt, C. C. AU - Klieve, A. V. AU - Blackall, L. L. AU - Ouwerkerk, D. AU - Woodland, E. AU - Trott, D. J. PY - 2008 DA - 2008// TI - Microbial ecology of the equine hindgut during oligofructose-induced laminitis JO - Isme Journal VL - 2 UR - https://doi.org/10.1038/ismej.2008.67 DO - 10.1038/ismej.2008.67 ID - Milinovich2008 ER - TY - JOUR AU - Garner, H. E. AU - Coffman, J. R. AU - Hahn, A. W. AU - Hutcheson, D. P. AU - Tumbleson, M. E. PY - 1975 DA - 1975// TI - Equine laminitis of alimentary origin - experimental model JO - Am J Vet Res VL - 36 ID - Garner1975 ER - TY - JOUR AU - Shirazi-Beechey, S. P. PY - 2008 DA - 2008// TI - Molecular insights into dietary induced colic in the horse JO - Equine Vet J VL - 40 UR - https://doi.org/10.2746/042516408X314075 DO - 10.2746/042516408X314075 ID - Shirazi-Beechey2008 ER - TY - JOUR AU - Durham, A. E. PY - 2009 DA - 2009// TI - The role of nutrition in colic JO - Vet Clin North America-Equine Practice VL - 25 UR - https://doi.org/10.1016/j.cveq.2008.11.003 DO - 10.1016/j.cveq.2008.11.003 ID - Durham2009 ER - TY - JOUR AU - Geor, R. J. PY - 2010 DA - 2010// TI - Current Concepts on the Pathophysiology of Pasture-Associated Laminitis JO - Vet Clin North Am-Equine Pract VL - 26 UR - https://doi.org/10.1016/j.cveq.2010.06.001 DO - 10.1016/j.cveq.2010.06.001 ID - Geor2010 ER - TY - JOUR AU - Geor, R. J. PY - 2009 DA - 2009// TI - Pasture-associated laminitis JO - Vet Clin North America-Equine Practice VL - 25 UR - https://doi.org/10.1016/j.cveq.2009.01.004 DO - 10.1016/j.cveq.2009.01.004 ID - Geor2009 ER - TY - CHAP PY - 2000 DA - 2000// BT - Lameness & laminitis in U.S. horses PB - United States Department of Agriculture CY - Fort Collins, Colorado ID - ref20 ER - TY - JOUR AU - Milinovich, G. J. AU - Klieve, A. V. AU - Pollitt, C. C. AU - Trott, D. J. PY - 2010 DA - 2010// TI - Microbial events in the hindgut during carbohydrate-induced equine laminitis JO - Vet Clin North America-Equine Practice VL - 26 UR - https://doi.org/10.1016/j.cveq.2010.01.007 DO - 10.1016/j.cveq.2010.01.007 ID - Milinovich2010 ER - TY - JOUR AU - Al Jassim, R. A. AU - Scott, P. T. AU - Trebbin, A. L. AU - Trott, D. AU - Pollitt, C. C. PY - 2005 DA - 2005// TI - The genetic diversity of lactic acid producing bacteria in the equine gastrointestinal tract JO - FEMS Microbiol Lett VL - 248 UR - https://doi.org/10.1016/j.femsle.2005.05.023 DO - 10.1016/j.femsle.2005.05.023 ID - Al Jassim2005 ER - TY - JOUR AU - Garner, H. E. AU - Moore, J. N. AU - Johnson, J. H. AU - Clark, L. AU - Amend, J. F. AU - Tritschler, L. G. AU - Coffmann, J. R. AU - Sprouse, R. F. AU - Hutcheson, D. P. AU - Salem, C. A. PY - 1978 DA - 1978// TI - Changes in cecal flora associated with onset of laminitis JO - Equine Vet J VL - 10 UR - https://doi.org/10.1111/j.2042-3306.1978.tb02273.x DO - 10.1111/j.2042-3306.1978.tb02273.x ID - Garner1978 ER - TY - JOUR AU - Daly, K. AU - Stewart, C. S. AU - Flint, H. J. AU - Shirazi-Beechey, S. P. PY - 2001 DA - 2001// TI - Bacterial diversity within the equine large intestine as revealed by molecular analysis of cloned 16S rRNA genes JO - FEMS Microbiol Ecol VL - 38 UR - https://doi.org/10.1111/j.1574-6941.2001.tb00892.x DO - 10.1111/j.1574-6941.2001.tb00892.x ID - Daly2001 ER - TY - JOUR AU - Gronvold, A. M. R. AU - L'Abee-Lund, T. M. AU - Strand, E. AU - Sorum, H. AU - Yannarell, A. C. AU - Mackie, R. I. PY - 2010 DA - 2010// TI - Fecal microbiota of horses in the clinical setting: Potential effects of penicillin and general anesthesia JO - Vet Microbiol VL - 145 UR - https://doi.org/10.1016/j.vetmic.2010.03.023 DO - 10.1016/j.vetmic.2010.03.023 ID - Gronvold2010 ER - TY - JOUR AU - Morita, H. AU - Nakano, A. AU - Shimazu, M. AU - Toh, H. AU - Nakajima, F. AU - Nagayama, M. AU - Hisamatsu, S. AU - Kato, Y. AU - Takagi, M. AU - Takami, H. PY - 2009 DA - 2009// TI - Lactobacillus hayakitensis, L-equigenerosi and L-equi, predominant lactobacilli in the intestinal flora of healthy thoroughbreds JO - Anim Sci J VL - 80 UR - https://doi.org/10.1111/j.1740-0929.2009.00633.x DO - 10.1111/j.1740-0929.2009.00633.x ID - Morita2009 ER - TY - JOUR AU - Goodson, J. AU - Tyznik, W. J. AU - Cline, J. H. AU - Dehority, B. A. PY - 1988 DA - 1988// TI - Effects of an abrupt diet change from hay to concentrate on microbial numbers and physical-environment in the cecum of the pony JO - App Environ Microbiol VL - 54 ID - Goodson1988 ER - TY - JOUR AU - Julliand, V. AU - de Fombelle, A. AU - Drogoul, C. AU - Jacotot, E. PY - 2001 DA - 2001// TI - Feeding and microbial disorders in horses: Part 3 - Effects of three hay: grain ratios on microbial profile and activities JO - J Equine Vet Sci VL - 21 UR - https://doi.org/10.1016/S0737-0806(01)70159-1 DO - 10.1016/S0737-0806(01)70159-1 ID - Julliand2001 ER - TY - JOUR AU - Mackie, R. I. AU - Wilkins, C. A. PY - 1988 DA - 1988// TI - Enumeration of anaerobic bacterial microflora of the equine gastrointestinal tract JO - Appl Environ Microbiol VL - 54 ID - Mackie1988 ER - TY - JOUR AU - Willing, B. AU - Voros, A. AU - Roos, S. AU - Jones, C. AU - Jansson, A. AU - Lindberg, J. E. PY - 2009 DA - 2009// TI - Changes in faecal bacteria associated with concentrate and forage-only diets fed to horses in training JO - Equine Vet J VL - 41 UR - https://doi.org/10.2746/042516409X447806 DO - 10.2746/042516409X447806 ID - Willing2009 ER - TY - JOUR AU - Yamano, H. AU - Koike, S. AU - Kobayashi, Y. AU - Hata, H. PY - 2008 DA - 2008// TI - Phylogenetic analysis of hindgut microbiota in Hokkaido native horses compared to light horses JO - Anim Sci J VL - 79 UR - https://doi.org/10.1111/j.1740-0929.2008.00522.x DO - 10.1111/j.1740-0929.2008.00522.x ID - Yamano2008 ER - TY - CHAP AU - Dougal, K. AU - Harris, P. A. AU - Edwards, A. AU - Pachebat, J. A. AU - Blackmore, T. M. AU - Worgan, W. J. AU - Newbold, C. J. PY - 2012 DA - 2012// TI - A comparison of the microbiome and the metabolome of different regions of the equine hindgut BT - FEMS Microbiol Ecol ID - Dougal2012 ER - TY - JOUR AU - Shepherd, M. L. AU - Swecker, W. S. AU - Jensen, R. V. AU - Ponder, M. A. PY - 2012 DA - 2012// TI - Characterization of the fecal bacteria communities of forage-fed horses by pyrosequencing of 16S rRNA V4 gene amplicons JO - FEMS Microbiol Lett VL - 326 UR - https://doi.org/10.1111/j.1574-6968.2011.02434.x DO - 10.1111/j.1574-6968.2011.02434.x ID - Shepherd2012 ER - TY - JOUR AU - Perkins, G. A. AU - den Bakker, H. C. AU - Burton, A. J. AU - Erb, H. N. AU - McDonough, S. P. AU - McDonough, P. L. AU - Parker, J. AU - Rosenthal, R. L. AU - Wiedmann, M. AU - Dowd, S. E. PY - 2012 DA - 2012// TI - The equine stomach harbors 1 an abundant and diverse mucosal microbiota JO - Appl Environ Microbiol VL - 78 UR - https://doi.org/10.1128/AEM.06252-11 DO - 10.1128/AEM.06252-11 ID - Perkins2012 ER - TY - JOUR AU - Wright, E. S. AU - Yilmaz, L. S. AU - Noguera, D. R. PY - 2012 DA - 2012// TI - DECIPHER, a search-based approach to chimera identification for 16S rRNA sequences JO - Appl Environ Microbiol VL - 78 ID - Wright2012 ER - TY - JOUR AU - Lozupone, C. A. AU - Hamady, M. AU - Kelley, S. T. AU - Knight, R. PY - 2007 DA - 2007// TI - Quantitative and qualitative beta diversity measures lead to different insights into factors that structure microbial communities JO - Appl Environ Microbiol VL - 73 UR - https://doi.org/10.1128/AEM.01996-06 DO - 10.1128/AEM.01996-06 ID - Lozupone2007 ER - TY - JOUR AU - Lozupone, C. AU - Lladser, M. E. AU - Knights, D. AU - Stombaugh, J. AU - Knight, R. PY - 2011 DA - 2011// TI - UniFrac: an effective distance metric for microbial community comparison JO - Isme Journal VL - 5 UR - https://doi.org/10.1038/ismej.2010.133 DO - 10.1038/ismej.2010.133 ID - Lozupone2011 ER - TY - JOUR AU - Dowd, S. E. AU - Callaway, T. R. AU - Wolcott, R. D. AU - Sun, Y. AU - McKeehan, T. AU - Hagevoort, R. G. AU - Edrington, T. S. PY - 2008 DA - 2008// TI - Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP) JO - BMC Microbiol VL - 8 ID - Dowd2008 ER - TY - JOUR AU - Shanks, O. C. AU - Kelty, C. A. AU - Archibeque, S. AU - Jenkins, M. AU - Newton, R. J. AU - McLellan, S. L. AU - Huse, S. M. AU - Sogin, M. L. PY - 2011 DA - 2011// TI - Community Structures of Fecal Bacteria in Cattle from Different Animal Feeding Operations JO - Appl Environ Microbiol VL - 77 UR - https://doi.org/10.1128/AEM.02988-10 DO - 10.1128/AEM.02988-10 ID - Shanks2011 ER - TY - JOUR AU - Ley, R. E. AU - Hamady, M. AU - Lozupone, C. AU - Turnbaugh, P. J. AU - Ramey, R. R. AU - Bircher, J. S. AU - Schlegel, M. L. AU - Tucker, T. A. AU - Schrenzel, M. D. AU - Knight, R. PY - 2008 DA - 2008// TI - Evolution of mammals and their gut microbes JO - Sci VL - 320 UR - https://doi.org/10.1126/science.1155725 DO - 10.1126/science.1155725 ID - Ley2008 ER - TY - JOUR AU - Julliand, V. AU - de Vaux, A. AU - Millet, L. AU - Fonty, G. PY - 1999 DA - 1999// TI - Identification of Ruminococcus flavefaciens as the predominant cellulolytic bacterial species of the equine cecum JO - Appl Environ Microbiol VL - 65 ID - Julliand1999 ER - TY - JOUR AU - DuPont, A. W. AU - DuPont, H. L. PY - 2011 DA - 2011// TI - The intestinal microbiota and chronic disorders of the gut JO - Nature Rev Gastroenterol Hepatol VL - 8 UR - https://doi.org/10.1038/nrgastro.2011.133 DO - 10.1038/nrgastro.2011.133 ID - DuPont2011 ER - TY - JOUR AU - Sinh, P. AU - Barrett, T. A. AU - Yun, L. PY - 2011 DA - 2011// TI - Clostridium difficile Infection and Inflammatory Bowel Disease: A Review JO - Gastroenterol Res Pract VL - 136064 UR - https://doi.org/10.1155/2011/136064 DO - 10.1155/2011/136064 ID - Sinh2011 ER - TY - JOUR AU - Musa, S. AU - Moran, C. AU - Rahman, T. PY - 2010 DA - 2010// TI - Clostridium difficile infection and liver disease JO - J Gastrointestinal and Liver Dis VL - 19 ID - Musa2010 ER - TY - JOUR AU - Songer, J. G. PY - 1998 DA - 1998// TI - Clostridial diseases of small ruminants JO - Vet Res VL - 29 ID - Songer1998 ER - TY - JOUR AU - Widyastuti, Y. AU - Lee, W. K. AU - Suzuki, K. AU - Mitsuoka, T. PY - 1992 DA - 1992// TI - Isolation and characterization of rice-straw degrading clostridia from cattle rumen JO - J Vet Med Sci VL - 54 UR - https://doi.org/10.1292/jvms.54.185 DO - 10.1292/jvms.54.185 ID - Widyastuti1992 ER - TY - JOUR AU - Santos, A. S. AU - Rodrigues, M. A. M. AU - Bessa, R. J. B. AU - Ferreira, L. M. AU - Martin-Rosset, W. PY - 2011 DA - 2011// TI - Understanding the equine cecum-colon ecosystem: current knowledge and future perspectives JO - Animal VL - 5 UR - https://doi.org/10.1017/S1751731110001588 DO - 10.1017/S1751731110001588 ID - Santos2011 ER - TY - JOUR AU - Werners, A. H. AU - Bull, S. AU - Fink-Gremmels, J. PY - 2005 DA - 2005// TI - Endotoxaemia: a review with implications for the horse JO - Equine Vet J VL - 37 UR - https://doi.org/10.2746/0425164054529418 DO - 10.2746/0425164054529418 ID - Werners2005 ER - TY - CHAP AU - Opal, S. M. ED - Ronco, C. ED - Piccinni, P. ED - Rosner, M. H. PY - 2010 DA - 2010// TI - Endotoxins and Other Sepsis Triggers BT - Endoxemia and Endotoxin Shock: Disease, Diagnosis and Therapy. Volume 167, edn UR - https://doi.org/10.1159/000315915 DO - 10.1159/000315915 ID - Opal2010 ER - TY - JOUR AU - Costa, C. C. AU - Weese, J. PY - 2012 DA - 2012// TI - The equine intestinal microbiome JO - Ani Health Res Rev VL - 13 UR - https://doi.org/10.1017/S1466252312000035 DO - 10.1017/S1466252312000035 ID - Costa2012 ER - TY - JOUR AU - Hintz, H. F. AU - Argenzio, R. A. AU - Schryver, H. F. PY - 1971 DA - 1971// TI - Digestion coefficients, blood glucose levels and molar percentage of volatile acids in intestinal fluid of ponies fed varying forage-grain ratios JO - J Anim Sci VL - 33 ID - Hintz1971 ER - TY - JOUR AU - Suchodolski, J. S. AU - Ruaux, C. G. AU - Steiner, J. M. AU - Fetz, K. AU - Williams, D. A. PY - 2004 DA - 2004// TI - Application of molecular fingerprinting for qualitative assessment of small-intestinal bacterial diversity in dogs JO - J Clin Microbiol VL - 42 UR - https://doi.org/10.1128/JCM.42.10.4702-4708.2004 DO - 10.1128/JCM.42.10.4702-4708.2004 ID - Suchodolski2004 ER - TY - JOUR AU - Dowd, S. F. AU - Sun, Y. AU - Wolcott, R. D. AU - Domingo, A. AU - Carroll, J. A. PY - 2008 DA - 2008// TI - Bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP) for microbiome studies: Bacterial diversity in the ileum of newly weaned Salmonella-infected pigs JO - Foodborne Pathogens and Disease VL - 5 UR - https://doi.org/10.1089/fpd.2008.0107 DO - 10.1089/fpd.2008.0107 ID - Dowd2008 ER - TY - JOUR AU - Rudi, K. AU - Skulberg, O. M. AU - Larsen, F. AU - Jakobsen, K. S. PY - 1997 DA - 1997// TI - Strain characterization and classification of oxyphotobacteria in clone cultures on the basis of 165 rRNA sequences from the variable regions V6, V7, and V8 JO - Appl Environ Microbiol VL - 63 ID - Rudi1997 ER - TY - JOUR AU - Baker, G. C. AU - Smith, J. J. AU - Cowan, D. A. PY - 2003 DA - 2003// TI - Review and re-analysis of domain-specific 16S primers JO - J Microbiol Methods VL - 55 UR - https://doi.org/10.1016/j.mimet.2003.08.009 DO - 10.1016/j.mimet.2003.08.009 ID - Baker2003 ER - TY - JOUR AU - Edgar, R. C. PY - 2010 DA - 2010// JO - Extreme high-speed clustering, alignment and database search VL - 1 ID - Edgar2010 ER - TY - JOUR AU - Gontcharova, V. AU - Youn, E. AU - Wolcott, R. D. AU - Hollister, E. B. AU - Gentry, T. J. AU - Dowd, S. E. PY - 2010 DA - 2010// TI - Black box chimera check (B2C2): a windows-based software for batch depletion of chimeras from bacterial 16S rRNA gene datasets JO - The Open Microbiology Journal VL - 4 UR - https://doi.org/10.2174/1874285801004010047 DO - 10.2174/1874285801004010047 ID - Gontcharova2010 ER - TY - JOUR AU - Altschul, S. F. AU - Gish, W. AU - Miller, W. AU - Myers, E. W. AU - Lipman, D. J. PY - 1990 DA - 1990// TI - Basic local alignment search tool JO - J Mol Biol VL - 215 UR - https://doi.org/10.1016/S0022-2836(05)80360-2 DO - 10.1016/S0022-2836(05)80360-2 ID - Altschul1990 ER - TY - JOUR AU - Caporaso, J. G. AU - Kuczynski, J. AU - Stombaugh, J. AU - Bittinger, K. AU - Bushman, F. D. AU - Costello, E. K. AU - Fierer, N. AU - Pena, A. G. AU - Goodrich, J. K. AU - Gordon, J. I. PY - 2010 DA - 2010// TI - QIIME allows analysis of high-throughput community sequencing data JO - Nature Methods VL - 7 UR - https://doi.org/10.1038/nmeth.f.303 DO - 10.1038/nmeth.f.303 ID - Caporaso2010 ER - TY - JOUR AU - Chao, A. AU - Bunge, J. PY - 2002 DA - 2002// TI - Estimating the number of species in a Stochastic abundance model JO - Biometrics VL - 58 UR - https://doi.org/10.1111/j.0006-341X.2002.00531.x DO - 10.1111/j.0006-341X.2002.00531.x ID - Chao2002 ER - TY - JOUR AU - Wang, Q. AU - Garrity, G. M. AU - Tiedje, J. M. AU - Cole, J. R. PY - 2007 DA - 2007// TI - Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy JO - Appl Environ Microbiol VL - 73 UR - https://doi.org/10.1128/AEM.00062-07 DO - 10.1128/AEM.00062-07 ID - Wang2007 ER - TY - JOUR AU - McDonald, D. AU - Price, M. N. AU - Goodrich, J. AU - Nawrocki, E. P. AU - DeSantis, T. Z. AU - Probst, A. AU - Andersen, G. L. AU - Knight, R. AU - Hugenholtz, P. PY - 2012 DA - 2012// TI - An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea JO - Isme J VL - 6 UR - https://doi.org/10.1038/ismej.2011.139 DO - 10.1038/ismej.2011.139 ID - McDonald2012 ER - TY - JOUR AU - Caporaso, J. G. AU - Bittinger, K. AU - Bushman, F. D. AU - DeSantis, T. Z. AU - Andersen, G. L. AU - Knight, R. PY - 2010 DA - 2010// TI - PyNAST: a flexible tool for aligning sequences to a template alignment JO - Bioinforma VL - 26 UR - https://doi.org/10.1093/bioinformatics/btp636 DO - 10.1093/bioinformatics/btp636 ID - Caporaso2010 ER - TY - JOUR AU - Price, M. N. AU - Dehal, P. S. AU - Arkin, A. P. PY - 2009 DA - 2009// TI - FastTree: Computing large minimum evolution trees with profiles instead of a distance matrix JO - Mol Biol Evol VL - 26 UR - https://doi.org/10.1093/molbev/msp077 DO - 10.1093/molbev/msp077 ID - Price2009 ER - TY - JOUR AU - Henneke, D. R. AU - Potter, G. D. AU - Kreider, J. L. AU - Yeates, B. F. PY - 1983 DA - 1983// TI - Relationship between condition score, physical measurements and body fat percentage in mares JO - Equine Vet J VL - 15 UR - https://doi.org/10.1111/j.2042-3306.1983.tb01826.x DO - 10.1111/j.2042-3306.1983.tb01826.x ID - Henneke1983 ER -