From: Isolation and phylogenetic analysis of orf virus from the sheep herd outbreak in northeast China
Geninfo Identifier (gi) | Strain | Species of origin | Country of origin | Genes | Reference | No. In nMDS |
---|---|---|---|---|---|---|
294653624 | JS04 | Sheep | China | ORFV011,ORFV059 | Liu et al. (2007)[17] | 1 |
336169664 | Gansu/2009 | Sheep | China | ORFV011 | Zhang et al. (unpublished) | 2 |
269854030 | Jilin | Sheep | China | ORFV011, ORFV059 | Zhao et al. (2010)[5] | 3 |
323364296 | Shanxi | Goat | China | ORFV011, ORFV059 | Shi (unpublished) | 4 |
284178603 | Hub/2009 | Goat | China | ORFV011 | Zhang et al. (2010)[12] | 5 |
336169666 | LiaoNing/10 | Goat | China | ORFV011 | zhang et al. (unpublished) | 6 |
365266883 | Xinjiang | Sheep | China | ORFV011 | Lui et al. (unpublished) | 7 |
365266887 | Shanxi/11 | Goat | China | ORFV011 | Lui et al. (unpublished) | 8 |
NA* | NA1/11 | Sheep | China | ORFV011, 059, 109, 110 | Present study | 9 |
197344484 | Hoping | Goat | Taiwan | ORFV011 | Chan et al. (2009)[18] | 10 |
114225403 | Natou | Goat | Taiwan | ORFV011 | Chan et al. (2007)[10] | 11 |
163860191 | Taiping | Goat | Taiwan | ORFV011 | Chan et al. (2007)[10] | 12 |
255040176 | Korea | Goat | Korea | ORFV011 | Oem et al. (2009)[19] | 13 |
82570507 | India67/04 | Sheep | India | ORFV011 | Hosamani et al. (2006)[11] | 14 |
284159117 | Mukteswar/09 | Sheep | India | ORFV011 | Veskatesan et al.(unpublished) | 15 |
82570509 | India79/04 | Sheep | India | ORFV011 | Hosamani et al. (2006)[11] | 16 |
82570503 | India82/04 | Goat | India | ORFV011 | Hosamani et al. (2006)[11] | 17 |
82570505 | India59/05 | Goat | India | ORFV011 | Hosamani et al. (2006)[11] | 18 |
371925323 | Assam/10 | Capra | India | ORFV011 | Bora et al. (unpublished) | 19 |
357595057 | Assam/09 | Capra | India | ORFV011 | Bora et al. (unpublished) | 20 |
308225028 | Muk/2000 | Goat | India | ORFV011 | Bora et al. (unpublished) | 21 |
367462731 | MT-05 | Sheep | Brazil | ORFV011 | Abrahao et al. (unpublished) | 22 |
344050163 | NE2 | Goat | Brazil | ORFV011 | Abrahao et al. (unpublished) | 23 |
367462733 | NE1 | Goat | Brazil | ORFV011 | Abrahao et al. (unpublished) | 24 |
344050167 | A | Goat | Brazil | ORFV011 | Abrahao et al. (unpublished) | 25 |
344050165 | D | Sheep | Brazil | ORFV011 | Abrahao et al. (unpublished) | 26 |
325073632 | D1701 | Goat | Germany | ORFV011, 059, 109, 110 | 27 | |
74230714 | NZ2 | Sheep | New Zealand | ORFV011, 059, 109, 110 | Mercer et al. (2006)[13] | 28 |
40019123 | OV-SA00 | Sheep | USA | ORFV011, 059, 109, 110 | Delhon et al. (2004)[14] | 29 |
40019122 | OV-IA82 | Sheep | USA | ORFV011, 059, 109, 110 | Delhon et al. (2004)[14] | 30 |
37594893 | NA | Musk ox | USA | ORFV011 | Guo et al. (2004)[20] | 31 |
37594897 | NA | Takin | USA | ORFV011 | Guo et al. (2004)[20] | 32 |
37594895 | NA | Sheep | USA | ORFV011 | Guo et al. (2004)[20] | 33 |
33415066 | NA | Goat | USA | ORFV011 | Guo et al. (2003)[20] | 34 |
33415068 | vaccine | Goat | USA | ORFV011 | Guo et al. (2003)[8] | 35 |
345843287 | F07.821R | Reindeer | Finland | ORFV011 | Hautaniemi et al. (2011)[21] | 36 |
345843285 | F07.816R | Reindeer | Finland | ORFV011 | Hautaniemi et al. (2011)[21] | 37 |
345843283 | F07.810R | Reindeer | Finland | ORFV011 | Hautaniemi et al. (2011)[21] | 38 |
345843281 | F07.808R | Reindeer | Finland | ORFV011 | Hautaniemi et al. (2011)[21] | 39 |
345843277 | F94.848R | Reindeer | Finland | ORFV011 | Hautaniemi et al. (2011)[21] | 40 |
345843279 | F92.849R | Reindeer | Finland | ORFV011 | Hautaniemi et al. (2011)[21] | 41 |
345843289 | F07.3748S | Sheep | Finland | ORFV011 | Hautaniemi et al. (2011)[21] | 42 |
345843291 | F09.1160S | Sheep | Finland | ORFV011 | Hautaniemi et al. (2011)[21] | 43 |
345843271 | F07.801R | Reindeer | Finland | ORFV011 | Hautaniemi et al. (2011)[21] | Â |
255761105 | Jodhpur | Camel | India | ORFV011 | Lucinda et al. (2010)[22] | Â |
295646610 | Cam/09 | Camel | India | ORFV011 | Venkatesan et al. (unpublished) | Â |
345843273 | F05.990C | Bovine | Finland | ORFV011 | Hautaniemi et al. (2011)[21] | Â |
345843275 | F10.3081C | Bovine | Finland | ORFV011 | Hautaniemi et al. (2011)[21] | Â |
345843269 | F07.798R | Reindeer | Finland | ORFV011 | Hautaniemi et al. (2011)[21] | Â |
37594899 | PCV | NA | USA | ORFV011 | Guo et al. (2004)[20] | Â |
37594901 | BPSV | NA | USA | ORFV011 | Guo et al. (2004)[20] | Â |
40019124 | BV-AR02 | Cattle | USA | ORFV011, 059, 09, 110 | Delhon et al. (2004)[14] | Â |