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Table 1 Herd variables assessed by the questionnaire and distribution of the pen samples by the categories of the outcome variable

From: Assessing risk profiles for Salmonella serotypes in breeding pig operations in Portugal using a Bayesian hierarchical model

 

Number of pen samples by the categories of the outcome variable

 

Number of pen samples by the categories of the outcome variable

 

1

2

3

 

1

2

3

HERD VARIABLES

Type of system

   

Management of breeding sows

   

Open air

29

0

1

more than 90% external source

835

17

68

Intensive

1242

38

110

>90% home raised

189

10

21

Missing observations

229

8

13

10-90% home raised

476

19

35

Type of herd

   

Control of rodents

   

Selection and Multiplication Unit

292

8

30

No

1254

42

114

Production Unit

1208

38

94

Yes

246

4

10

Region of the herd

   

Source of semen

   

Alentejo

229

8

13

Insemination centre – IC

491

11

18

Centre

278

8

34

Own boar + IC

869

23

88

Lisbon and Tagus Valley

914

27

59

Boar from another herd

79

9

12

North

79

3

18

Missing observations

61

3

6

Type of production

   

Source of replacement pigs

   

Farrow-to-weaners

164

5

21

Just own herd

585

14

41

Farrow-to-growers

250

7

13

Others sources

906

31

83

Farrow-to-finish

794

26

60

Missing observations

9

1

0

Missing observations

292

8

30

Number of finishers pigs/herd

   

Number of boars

   

<100

263

3

14

<3

715

22

33

≥100

1221

42

107

≥3

785

24

91

Missing observations

16

1

3

Number of sows

   

Control of birds

   

<170

759

16

55

No

1192

34

94

≥170

741

30

69

Yes

308

12

30

Number of gilts

   

Use of foot bath

   

<22

713

20

47

No

1017

38

85

≥22

787

26

77

Yes

483

8

39

Size of the herd (number of breeding pigs)

   

Clothes for exclusive use in the herd

   

<203

759

16

55

Yes

1423

46

121

≥203

741

30

69

No

77

0

3

Management of breeding boars

   

Herd replacement policy

   

more than 90% external source

606

24

70

Good

434

7

29

without boars or >90% home raised

735

15

40

Bad

1066

39

95

    

Biosecurity measures

   

10-90% external source or home raised

159

7

14

Yes

828

30

72

    

No

672

16

52

  1. Legend: 1 (no Salmonella), 2 (serotype Typhimurium or serotype 1,4,5,12:i:-), 3 (other serotypes).