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Table 4 Summary of gene information

From: Effect of hypoxia on equine mesenchymal stem cells derived from bone marrow and adipose tissue

Gene

Accession number

Primer sequence (5’-3’)

Amplicon size (bp)

CD29 a

XM_001492665

F: GTAAAAAGTCTTGGAACCGATCTGAT

81

  

R: CACAAATGAGCCAAACCCAATT

 

CD34 a

XM_001491596

F:CACTAAACCCTCTACATCATTTTCTCCTA

150

  

R: GGCAGATACCTTGAGTCAATTTCA

 

CD44 a

NM_001085435

F: CCCACGGATCTGAAACAAGTG

95

  

R: TTCTGGAATTTGAGGTCTCCGTAT

 

CD49d a

XM_001917601

F: CATCGGCCTTCTCACAGAGAA

101

  

R: GCCATTATTGTCTGCATCAATTTG

 

CD73 a

XM_001500115

F: GGGATTGTTGGATACACTTCAAAAG

90

  

R: GCTGCAACGCAGTGATTTCA

 

CD90 a

EU881920

F: TGCGAACTCCGCCTCTCT

93

  

R: GCTTATGCCCTCGCACTTG

 

CD105 a

XM_001500078

F: GACGGAAAATGTGGTCAGTAATGA

100

  

R: GCGAGAGGCTCTCCGTGTT

 

CD106 a

NM_001101650

F: CATCGTGACCTGTGGGCATA

111

  

R: TGGGTTTCCCTCCACTAGCA

 

CD146 a

XM_001917594

F: CTGGACTTGGAAACCACAACATC

85

  

R: CAGGTCTCACTCGGACATCAGA

 

CD166 a

XM_001503380

F: GTCTGGTCTTCTGCCTCTTGATC

103

  

R: TCGGCAAGGCATGATAATAGTG

 

HIF-1α

XM_001493206

F: AATCCAAAGATCCTGGCGTTG

103

  

R: GCTGCTGTAGTAATGCGCCAAT

 

OCT4 b

XM_001490108

F: AGAGGCAACCTGGAGAACATG

70

  

R: GGGCAATGTGGCTGATCTG

 

NANOG b

XM_001498808

F: TACCTCAGCCTCCAGCAGAT

119

  

R: CAGTTGTTTTTCTGCCACCT

 

SOX2 c

FJ356148

F: TGGTTACCTCTTCCTCCCACT

178

  

R: GGGCAGTGTGCCGTTAAT

 

GAPDH a

NM_001163856

F: GGCAAGTTCCATGGCACAGT

128

  

R: CACAACATATTCAGCACCAGCAT

 

B2M a

NM_001082502

F: TCGTCCTGCTCGGGCTACT

102

  

R: ATTCTCTGCTGGGTGACGTGA

 
  1. a previously described in [43].
  2. b previously described in [40].
  3. c previously described in [47].
  4. Genes analysed, GenBank accession numbers, primer sequences for reverse transcriptase RT-PCR (F: forward and R: reverse) and amplicon sizes in base pairs (bp).