Table 1 Sample information of the 33 strains of Francisella spp. included in the current study.
Strain name | Year | Host | Location |
|---|---|---|---|
F. noatunensis subsp. noatunensis | |||
FnnR-001/04 (GM2212) | 2004 | Atlantic cod (Gadus morhua), farmed | Rogaland county |
NCIMB 14265T | 2005 | Atlantic cod (G. morhua), farmed | Hordaland county |
FnnR-017/05 | 2005 | Atlantic cod (G. morhua), farmed | Rogaland county |
FnnC-UA2660A | 2006 | Farmed Atlantic salmon (Salmo salar) | Region X Chile |
FnnR-002/06 | 2006 | Atlantic cod (G. morhua), farmed | Rogaland county |
FnnR-003/06W | 2006 | Atlantic cod (G. morhua), wild caught | Rogaland county |
FnnR-004/06 | 2006 | Atlantic cod (G. morhua), farmed | Rogaland county |
FnnMR-005/06 | 2006 | Atlantic cod (G. morhua), farmed | Møre og Romsdalen county |
FnnN-006/06 | 2006 | Atlantic cod (G. morhua), farmed | Nordland county |
FnnH-007/06 F | 2006 | Atlantic cod (G. morhua), farmed | Hordaland county |
FnnH-008/06W | 2006 | Atlantic cod (G. morhua), wild caught | Rogaland/Hordaland county |
FnnH-014/06F | 2006 | Atlantic cod (G. morhua), farmed | Hordaland county |
FnnAA-009/07W | 2007 | Atlantic cod (G. morhua), wild caught | Aust Agder |
FnnVA-010/07W | 2007 | Atlantic cod (G. morhua), wild caught | Vest-Agder |
FnnMR-011/07 | 2007 | Atlantic cod (G. morhua), farmed | Møre og Romsdalen county |
FnnSF-012/07 | 2007 | Atlantic cod (G. morhua), farmed | Sogn og Fjordane county |
FnnMR-013/07 | 2007 | Atlantic cod (G. morhua), farmed | Møre og Romsdalen county |
FnnMR-015/08F | 2008 | Atlantic cod (G. morhua), farmed | Møre og Romsdalen county |
FnnH-016/08 F | 2008 | Atlantic cod (G. morhua), farmed | Hordaland county |
FnnSF-018/09 | 2009 | Atlantic cod (G. morhua), farmed | Sogn og Fjordane county |
FnnSF-019/09 | 2009 | Atlantic cod(G. morhua), farmed | Sogn og Fjordane county |
FnnH-020/09 | 2009 | Atlantic cod (G. morhua), farmed | Hordaland county |
F. noatunensis subsp. orientalis | |||
FnoJ-001/02 (Ehime-1)B | 2002 | Farmed Three-line grunt (Parapristipoma trilineatum) | Ehime prefecture, Japan |
FnoI-002/04C | 2004 | Farmed tilapia (Oreochromis spp.) | Lake Toba, Indonesia |
FnoI-003/05C | 2005 | Farmed tilapia (Oreochromis spp.) | Lake Toba, Indonesia |
FnoI-004/07C (Ind04) | 2007 | Farmed tilapia (Oreochromis spp.) | Lake Wadaslingtan, Indonesia |
F. philomiragia | |||
FpDSM7535T | 1959 | Muskrat from Bear River refuge | Utah, USA |
FpCCUG19701 | 1960 | Water, from a river in Bear River refuge | Utah, USA |
FpCCUG13404 | 1979 | Human, bone marrow | Zurich, Switzerland |
FpCCUG12603 | 1982 | Human, abscess | Gøteborg, Sweden |
Fp1951D | 2003 | Human, blood | Denmark |
Fp080107 -IE | 2007 | Environmental sample direct isolation | Marthas Vineyard, USA |
Fp080107 -IIE | 2007 | Environmental sample after passage through a mice | Marthas Vineyard, USA |