Compartment | Function | Proteins |
---|---|---|
Extracellular | Lung's innate immunity | SERPINA1; surfactant protein D (SFTPD), transferrin (TF), complement factor B (CFB), complement component 3 (C3), complement component 5 (C5) |
Immunoglobulins | immunoglobulin heavy constant gamma 1 (IGHG1), immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides (IGJ); immunoglobulin kappa constant (IGKC) | |
Tumor Necrosis Factor family | lymphotoxin beta (TNF superfamily, member 3) (LTB) | |
Other proteins | apolipoprotein A-I (APOA1), wingless-type MMTV integration site family member 7A (WNT7A), laminin beta 3 (LAMB3), Albumin (ALB) and secretoglobin, family 1A, member 1 (SCGB1A1) fibrinogen alpha chain (FGA); Plasminogen (PLG); serpin peptidase inhibitor clade C (antithrombin) member 1 (SERPINC1); von Willebrand factor (VWF); serpin peptidase inhibitor clade A (alpha-1 antiproteinase antitrypsin), member 1 (SERPINA1) | |
Cell membrane | Immunoglobulin | immunoglobulin heavy constant mu (IGHM) |
Immunoglobulins-receptor | polymeric immunoglobulin receptor (PIGR) | |
MHC class II | major histocompatibility complex, class II, DQ beta 1 (HLA-DQB1) | |
Adhesive interactions (e.g. granulocytes) | integrin, alpha M (complement component 3 receptor 3 subunit) [ITGAM] | |
Hemostasis | thrombomodulin (THBD) | |
Other proteins | ATP-binding cassette, sub-family B (MDR/TAP), member 1 (ABCB1) mucin 20, cell surface associated (MUC20); platelet-derived growth factor receptor, alpha polypeptide (PDGFRA) | |
Cytoplasm | Respiratory chain enzyme | ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit (ATP5O); |
Induction of NF-kappa-B | nucleotide-binding oligomerization domain containing 2 (NOD2) | |
Protection from oxidative stress | aldehyde dehydrogenase 7 family, member A1(ALDH7A1); glutathione S-transferase theta 1 (GSTT1) | |
necessary for target cell lysis in cell-mediated immune responses | granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) (GZMB) | |
Other Proteins | calponin 1, basic, smooth muscle (CNN1); serpin peptidase inhibitor, clade B (ovalbumin), member 10 (SERPINB10); uveal autoantigen with coiled-coil domains and ankyrin repeats (UACA); ribosomal protein S6 kinase, 90 kDa, polypeptide 4 (RPS6KA4); sorting nexin 9 (SNX9); heat shock 70 kDa protein 1-like (HSPA1L); actin, beta (ACTB); Glutaminase (GLS); ribosomal protein L23a (RPL23A); immediate early response 3 (IER3); thimet oligopeptidase 1 (THOP1); ferritin, light polypeptide (FTL); coproporphyrinogen oxidase (CPOX) | |
Nucleus | Tumor suppressors | retinoblastoma-like 1 (p107) (RBL1); retinoblastoma 1 (RB1) |
Represses transcription of NF-kappa-B in response to TNF | ribosomal protein S6 kinase, 90 kDa, polypeptide 5 (RPS6KA5); forkhead box P3 (FOXP3) | |
Probable transcription factor | forkhead box P3 (FOXP3) | |
positive regulator of apoptosis | serine/threonine kinase 17b (STK17B) | |
Involved in DNA repair mechanism | protein kinase, DNA-activated, catalytic polypeptide (PRKDC); | |
Other Proteins | bromodomain and PHD finger containing, 1 (BRPF1); heterogeneous nuclear ribonucleoprotein A3 (HNRNPA3); zinc finger and BTB domain containing 16 (ZBTB16) |