From: SNR analysis: molecular investigation of an anthrax epidemic
MLVA 25 | Â | Â | Â | Â | Â | Â | Â | Â | Â |
---|---|---|---|---|---|---|---|---|---|
Cluster | No. of Isolates | Allele Coding | |||||||
A1.a | 53 | VrrA: 10; vrrB1: 16; vrrB2: 7; vrrC1: 57; vrrC2: 21; CG3: 1; bams1: 13; bams 3: 30; bams5: 7; bams13: 30; bams15: 45; bams21: 10; bams22: 16; bams23: 11; bams24: 11; bams25: 13; bams28: 14; bams30: 75; bams31: 64; bams34: 8; bams44: 8; bams51: 9; bams53: 8; pXO1: 7; pXO2: 7. | |||||||
SNR ANALYSES | |||||||||
 |  | STR-MTD | KEN-MTD | ||||||
Subgenotype | No. of Isolates | Loci | Loci | ||||||
 |  | CL33 | CL12 | CL1 | CL37 | CL33 HM1 | CL12 HM2 | CL10 HM6 | CL35 HM13 |
SGT-1 | 46 | 294 | 172 | 243 | 212 | 83 | 91 | 107 | 117 |
SGT-2 | 4 | 293 | 172 | 243 | 212 | 82 | 91 | 107 | 117 |
SGT-3 | 1 | 295 | 172 | 243 | 212 | 84 | 91 | 107 | 117 |
SGT-4 | 1 | 294 | 173 | 243 | 212 | 83 | 92 | 107 | 117 |
SGT-5 | 1 | 289 | 173 | 243 | 212 | 78 | 92 | 106 | 117 |
TOTAL | 53 | - | - | - | - | - | - | - | - |