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Table 2 US8 nucleotide and amino acid sequence similarities between the Anlier isolate and ruminant alphaherpesviruses

From: Isolation and characterisation of a ruminant alphaherpesvirus closely related to bovine herpesvirus 1 in a free-ranging red deer

  Nucleotide similarity
  US8 BoHV-1 Lam (1.1) BoHV-1 K22 (1.2) BoHV-5 N569 BuHV-1 b6 CpHV-1 Ba-1 CvHV-1 Banf. 82 CvHV-2 Salla 82 ElkHV-1 CvHV-1 Anlier SuHV-1 Becker
Amino acid similarity BoHV-1 Lam (1.1)   99.4 85.3 86.5 76.2 83.4 76.5 83.7 83.1 50.2
  BoHV-1 K22 (1.2) 99   85 86.6 76.3 83.6 76.5 83.9 83.2 50
  BoHV-5 N569 76.4 75.9   96.5 74.8 87.3 80.6 88.3 87 53.9
  BuHV-1 b6 78.8 79.8 92.7   76.8 89 80.9 90 88.8 54
  CpHV-1 Ba-1 59.7 60.1 59.3 61.2   77.8 76.3 78.6 77.8 50.2
  CvHV-1 Banf. 82 69.8 70.8 76.4 79.8 60.2   82.6 97.5 97.3 53.2
  CvHV-2 Salla 82 64.5 65 67.3 69.8 60.2 70.3   82.7 82.4 52.9
  ElkHV-1 69.8 70.8 77.8 81.2 61.2 94.2 70.8   96.2 53.9
  CvHV-1 Anlier 70.3 71.2 76.4 80.2 57.8 95.1 69.8 92.3   52.4
  SuHV-1 Becker 25 25 30.4 30.7 25.8 28.7 25.3 29.1 27.2  
  1. Suid herpesvirus 1 (SuHV-1) Becker strain was used as an outgroup.