Table 3 Results of RTqPCR for BRSV at herd level with corresponding strain and sequence ID of positive herds
Herd no. | BRSV RTqPCR | Retrieved sequence | BRSV strain | Sequence ID |
|---|---|---|---|---|
1 | - | nt | Â | Â |
2 | + | + | B | A2/N/09 |
3 | nt | nt | Â | Â |
4 | + | + | B | A3/N/09 |
5 | nt | nt | Â | Â |
6 | + | + | B | O1/N/09 |
7 | + | - | Â | Â |
8 | + | - | Â | Â |
9 | - | nt | Â | Â |
10 | + | - | Â | Â |
11 | + | + | A | O2/N/10 |
12 | - | nt | Â | Â |
13 | + | + | A | Os1/N/10 |
14 | + | + | A | O3/N/10 |
15 | + | - | Â | Â |
16 | + | - | Â | Â |
17* | + | + | B | O4-4B/N/11 |
| Â | Â | Â | Â | O4-4S/N/11 |
18 | + | + | B | O5/N/11 |
19 | + | + | A | H1/N/11 |
20 | + | + | A | R1/N/11 |
21 | + | nt | Â | Â |
Total no. of pos | 16 | 10 | Â | Â |