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Table 7 Effects of dietary tannin and herbal mixture supplementation on alpha diversity indices and relative abundances (%) of rumen archaea in goats

From: Rumen fermentation and microbiota in Shami goats fed on condensed tannins or herbal mixture

 

Treatments

Mean

SEM

P-value

C

T

HM

Alpha diversity

Sequences reads:

8606

8127

18,253

11,880

2411

0.14

Observed ASVs

19.2

27

27.6

25

2.71

0.40

Chao1

19.2

26.8

27.6

24.53

2.71

0.40

Shannon

2.29

2.15

2.58

2.34

0.13

0.44

Invsimpsone

7.19

6.54

9.47

7.73

0.96

0.46

The relative abundances of archaeal genera (%)

P:Euryarchaeota; F: Methanobacteriaceae

      

Methanobrevibacter

99.00b

98.80b

96.69a

98.16

0.36

0.006

Methanosphaera

0

0

0.87

0

0

0

P: Thermoplasmatota; F: Methanomethylophilaceae

      

Unclass_Methanomethylophilaceae

0.81

0.89

1.88

1.20

0.21

0.05

G: Candidatus Methanomethylophilus

0.17a

0.16a

0.45b

0.26

0.04

0.01

P: Halobacterota

      

F: Halococcaceae; G: Halococcus

0

0

0.08

0

0

0

F: Haloferacaceae; G: Natronococcus

0

0

0.06

0

0

0

  1. C = diet without supplementation; T = diet supplemented with tannins;
  2. HM = diet supplemented with herbal mixture; SEM = standard error of the mean