Occurrence and characteristics of extended-spectrum β-lactamase (ESBL) producing Enterobacteriaceae in food producing animals, minced meat and raw milk

Geser, Nadine; Stephan, Roger; Hächler, Herbert

doi:10.1186/1746-6148-8-21

Table 2 Identification and further characterization of the 91 ESBL producers isolated from 334 healthy food-producing animals at slaughter and from 67 Escherichia coli mastitis milk samples in Switzerland

From: Occurrence and characteristics of extended-spectrum β-lactamase (ESBL) producing Enterobacteriaceae in food producing animals, minced meat and raw milk

Sample number	Origin	Species	Expressed ESBL & accompanying β- lactamase	β-lactam antibiotic resistances										Additional resistance
				AM	AMC	CF	CXM	CPD	CTX	CAZ	FEP	FOX	IPM
13	pig	E. coli	CTX-M-1	r	s	r	r	r	i^a	s^a	s^a	ss	s	NA. S, SXT, TE
14	pig	E. coli	CTX-M-1	r	s	r	r	r	i^a	s^a	i^a	s	s	NA, TE
64	pig	E. coli	CTX-M-1	r	s	r	r	r	r	s^a	s^a	s	s	SXT
65	pig	E. coli	CTX-M-1	r	s	r	r	r	i^a	s^a	s^a	s	s	NA, TE
17	pig	E. coli	CTX-M-1 & TEM-1	r	s	r	r	r	r	s^a	s^a	s	s	CIP, NA, S, TE
18	pig	E. coli	CTX-M-1 & TEM-1	r	s	r	r	r	r	s^a	i^a	s	s	C, CIP, NA, S, SXT, TE
72	pig	E. coli	CTX-M-1 & TEM-1	r	s	r	r	r	i^a	s^a	s^a	s	s	S, SXT
60	pig	E. coli	CTX-M-1 & TEM-186	r	s	r	r	r	i^a	s^a	s^a	s	s	S, SXT
16	pig	E. coli	CTX-M-14 & TEM-1	r	s	r	r	r	r	s^a	s^a	s	s	CIP, GM, NA, S, SXT, TE
46	calf	E. coli	CTX-M-1	r	s	r	r	r	i^a	s^a	s^a	s	s	C, GM, S, SXT, TE
112	calf	E. coli	CTX-M-1	r	s	r	r	r	r	s^a	s^a	s	s	C, GM, S, SXT, TE
114	calf	E. coli	CTX-M-1	r	s	r	r	r	r	s^a	s^a	s	s	C, GM, S, SXT, TE
142.09_b	calf	E. coli	CTX-M-1	r	s	r	r	r	r	s^a	s^a	s	s	C, GM, S, SXT, TE
142.09_g	calf	C. youngae	CTX-M-1	r	s	r	r	r	r	s^a	s^a	s	s	C, GM, S, SXT, TE
68	young cow	E. coli	CTX-M-1	r	s	r	r	r	r	s^a	s^a	s	s	NA
128	calf	E. coli	CTX-M-1	r	s	r	r	r	i^a	s^a	r	s	s	S, SXT, TE
136	calf	E. coli	CTX-M-1	r	s	r	r	r	r	s^a	s^a	s	s	CIP, NA, TE
129	calf	E. coli	CTX-M-1 & TEM-1	r	s	r	r	r	i^a	s^a	s^a	s	s	S, SXT, TE
104	calf	E. coli	CTX-M-1 & TEM-1	r	s	r	r	r	i^a	s^a	s^a	s	s	C, GM, S, SXT, TE
47	calf	E. coli	CTX-M-15	r	s	r	r	r	r	i^a	s^a	s	s	C, GM, S, SXT, TE
52	calf	E. coli	CTX-M-15	r	s	r	r	r	r	i^a	r	s	s	CIP, NA, GM, SXT, TE
53	calf	E. coli	CTX-M-15	r	i	r	r	r	r	i^a	i^a	s	s	CIP, NA
124	calf	E. coli	CTX-M-15	r	s	r	r	r	r	r	s^a	s	s	CIP, NA, S
142.11_n	calf	E. coli	CTX-M-117 & TEM-1	r	s	r	r	r	i^a	s^a	s^a	s	s	C, CIP, GM, NA, S, SXT, TE
115	calf	E. coli	CTX-M-14 & TEM-1	r	i	r	r	r	i^a	s^a	s^a	s	s	C, CIP, NA, SXT
116	calf	E. coli	CTX-M-14 & TEM-1	r	i	r	r	r	i^a	s^a	s^a	s	s	C, CIP, GM, NA, S, SXT, TE
2	lamb	E. coli	CTX-M-1 & TEM-1	r	s	r	r	r	r	s^a	s^a	s	s	C, NA, S, TE
108	sheep	E. coli	CTX-M-15 & TEM-1	r	i	r	r	r	r	i^a	i^a	s	s	CIP, GM, S, SXT, TE
100	sheep	E. coli	CTX-M-14 & TEM-1	r	s	r	r	r	i^a	s^a	s^a	s	s	C, CIP, GM, NA, S, TE
102	sheep	E. coli	CTX-M-14 & TEM-1	r	i	r	r	r	i^a	s^a	s^a	s	s	C, CIP, GM, NA, S, TE
11	lamb	E. cloacae	SHV-12 & TEM-1	r	r	r	r	r	i^a	r	s^a	r	s	C, S, SXT, TE
3	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	NA, TE
4	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	r	s^a	s^a	s	s	TE
8	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	SXT, TE
10	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	r	s^a	s^a	s	s	S, SXT, TE
12	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	r	s^a	s^a	s	s	NA, SXT, TE
16	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	NA, TE
17	chicken	E. coli	CTX-M-1	r	s	r	r	r	r	s^a	s^a	s	s	NA, TE
26	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	TE
30	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	TE
31	chicken	E. coli	CTX-M-1	r	s	r	r	r	i^a	s^a	s^a	s	s	SXT, TE
33	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	r	s^a	i^a	s	s	NA, TE
35	chicken	E. coli	CTX-M-1	r	s	r	r	r	i^a	r	s^a	s	s	NA, SXT, TE
40	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	SXT, TE
41	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	r	s^a	s^a	s	s	SXT
42	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	NA, TE
43	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	SXT, TE
44	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	NA, SXT, TE
45	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	NA, SXT
46	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	SXT, TE
47	chicken	E. coli	CTX-M-1	r	s	r	r	r	r	s^a	s^a	s	s	S, SXT, TE
48	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	r	s^a	s^a	s	s	SXT, TE
49	chicken	E. coli	CTX-M-1	r	s	r	r	r	i^a	s^a	s^a	s	s	S, SXT, TE
51	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	NA, SXT, TE
52	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	r	s^a	s^a	s	s	NA, SXT, TE
53	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	SXT, TE
58	chicken	E. coli	CTX-M-1	r	s	r	r	r	i^a	s^a	s^a	s	s	GM, NA, SXT, TE
59	chicken	E. coli	CTX-M-1	r	s	r	r	r	i^a	s^a	s^a	s	s	C, SXT, TE
60	chicken	E. coli	CTX-M-1	r	s	r	r	r	i^a	s^a	s^a	s	s	SXT, TE
62	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	SXT, TE
63	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	SXT, TE
64	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	NA, SXT
65	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	TE
67	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	SXT, TE
68	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	SXT, TE
73	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	NA, TE
74	chicken	E. coli	CTX-M-1	r	s	r	r	r	i^a	s^a	s^a	s	s	TE
76	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	r	s^a	s^a	s	s	NA
78	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	r	s^a	s^a	s	s	NA, TE
86	chicken	E. coli	CTX-M-1	r	s	r	r	r	i^a	s^a	s^a	s	s	TE
87	chicken	E. coli	CTX-M-1	r	s	r	r	r	r	s^a	s^a	s	s	TE
88	chicken	E. coli	CTX-M-1	r	s	r	r	r	r	s^a	s^a	s	s	NA, SXT
91	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	NA, TE
92	chicken	E. coli	CTX-M-1	r	s	r	r	r	i^a	s^a	s^a	s	s	S, TE
94	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	r	s^a	s^a	s	s	TE
96	chicken	E. coli	CTX-M group 1⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	NA, SXT, TE
20	chicken	E. coli	CTX-M group 1/TEM⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	CIP, NA, SXT, TE
27	chicken	E. coli	CTX-M group 1/TEM⁺	r	s	r	r	r	i^a	s^a	s^a	s	s	S, SXT, TE
32	chicken	E. coli	CTX-M-1 & TEM-1	r	s	r	r	r	r	s^a	s^a	s	s	SXT, TE
36	chicken	E. coli	CTX-M group 1/TEM⁺	r	i	r	r	r	i^a	s^a	s^a	s	s	SXT, TE
82	chicken	E. coli	CTX-M group 1/TEM⁺	r	s	r	r	r	r	s^a	s^a	s	s	SXT, TE
84	chicken	E. coli	CTX-M-1 & TEM-1	r	s	r	r	r	r	s^a	s^a	s	s	NA, SXT, TE
85	chicken	E. coli	CTX-M group 1/TEM⁺	r	s	r	r	r	r	s^a	s^a	s	s	NA, SXT, TE
97	chicken	E. coli	CTX-M group 1/TEM⁺	r	s	r	r	r	r	s^a	s^a	s	s	SXT, TE
5	chicken	E. coli	SHV-12	r	s	r	i^a	r	i^a	i^a	s^a	s	s	-
2	chicken	E. coli	SHV-12	r	s	r	i^a	r	i^a	s^a	s^a	s	s	C, NA, TE
34	chicken	E. coli	SHV-12 & TEM-1	r	s	r	s^a	r	s^a	i^a	s^a	s	s	NA, SXT, TE
77	chicken	E. coli	SHV-12 & TEM-1	r	s	r	i^a	r	i^a	i^a	s^a	s	s	NA, SXT, TE
23	chicken	E. coli	TEM-52	r	s	r	i^a	r	i^a	s^a	s^a	s	s	NA
70	chicken	E. coli	TEM-52	r	s	r	r	r	i^a	s^a	s^a	s	s	NA
1,006	mastitis milk	E. coli	CTX-M-14 & TEM-1	r	r	r	r	r	i^a	s^a	s^a	s	s	C, GM, NA S, SXT, TE

⁺) not further characterized
s, sensitive; i, intermediate; r, resistant
^a) It is known that many ESBL producers may appear susceptible or intermediate to oxyimino cephalosporins in vitro if CLSI criteria are applied strictly, but do not respond to the respective therapies. Consequently, for clinical reporting these results have to be corrected to "resistant".
AM, ampicillin; AMC, amoxicillin-clavulanic acid; CF, cephalothin; CXM, cefuroxime; CPD, cefpodoxime; CTX, cefotaxime; CAZ, ceftazidime; FEP, cefepime; FOX, cefoxitin; IPM, imipenem
C, chloramphenicol; CIP, ciprofloxacin; GM, gentamicin; NA, nalidixic acid; S, streptomycin; SXT, trimethoprim-sulfamethoxazole; TE, tetracycline

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