From: Ovine reference materials and assays for prion genetic testing
 |  |  |  | Prnpcodon genotypesa | Genotypes for sample identificationb | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GenBank Acc. No. | MARC animal no. | Breed | Sex | codons 136 154 171 | codons 112 136 141 154 171 237 | 1c | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 |
AY907691 | 200423666 | MARCIII Composite | ram | ARR, ARR | MALRRL, MALRRL | R | C | Y | T | R | W | G | T | G | R | G | K | W | G | R | G | Y | Y | R | C |
DQ345759 | 200323140 | MARCIII Composite | eve | ARR, ARQ | MALRRL, MALRQL | G | Y | Y | Y | A | T | T | Y | R | G | G | T | W | S | G | A | Y | C | R | Y |
AY907682 | 199735002 | Rambouillet | ram | ARR, AHQ | MALRRL, MALHQL | A | C | C | C | R | W | G | T | G | R | G | G | W | G | R | R | Y | C | G | T |
AY907681 | 200450394 | Texel cross | ram | ARR, ARH | MALRRL, MALRHL | R | T | Y | C | R | W | G | C | R | A | T | O | T | S | G | R | Y | Y | R | C |
AY907688 | 200423500 | MARCIII Composite | ram | ARR, VRQ | MALRRL, MVLRQL | A | Y | T | Y | A | T | G | C | R | R | K | G | W | S | A | R | Y | Y | G | T |
EF189729 | 200665217 | Navajo Churro cross | ewe | ARR, ARK | MALRRL, MALRKL | G | Y | Y | T | G | W | K | C | R | A | G | K | T | S | G | R | Y | C | A | Y |
AY907689 | 200423510 | MARCIII Composite | ram | ARQ, ARQ | MALRQL, MALRQL | R | C | C | Y | A | A | G | T | R | R | K | K | W | S | R | R | Y | T | A | Y |
AY907687 | 200206039 | Texel | ram | ARQ, AHQ | MALRQL, MALHQL | G | Y | Y | Y | R | A | G | Y | A | A | K | K | A | S | G | A | T | Y | A | C |
AY907693 | 200450134 | Texel cross | ram | ARQ, ARH | MALRQL, MALRHL | R | Y | Y | T | G | A | K | T | R | A | K | G | T | G | R | R | T | Y | G | C |
AY907690 | 200423529 | MARCIII Composite | ram | ARQ, VRQ | MALRQL, MVLRQL | R | T | Y | Y | G | T | K | C | R | R | T | G | A | C | A | R | T | Y | R | Y |
EF189727 | 200665234 | Navajo Churro cross | ram | ARQ, ARK | MALRQL, MALRKL | R | Y | Y | Y | G | W | G | Y | R | A | K | T | T | G | G | G | O | C | R | Y |
AY909542 | 199935904 | Rambouillet | ram | AHQ, AHQ | MALHQL, MALHQL | A | C | T | C | G | T | K | Y | G | R | K | K | A | C | G | R | Y | Y | A | Y |
AY907692 | 200450114 | Texel cross | ewe | AHQ, ARH | MALHQL, MALRHL | R | T | Y | C | R | W | G | Y | R | A | K | G | W | S | G | A | T | T | R | Y |
AY907686 | 200177091 | Rambouillet-Romanov | ewe | AHQ, VRQ | MALHQL, MVLRQL | R | Y | T | C | R | T | G | Y | R | G | T | G | W | S | G | R | Y | T | A | Y |
EF189725 | 200665201 | Navajo Churro cross | ram | AHQ, ARK | MALHQL, MALRKL | A | C | Y | Y | R | W | G | T | R | A | G | K | A | G | G | A | Y | C | R | Y |
AY907683 | 200006024 | Texel | ram | ARH, ARH | MALRHL, MALRHL | A | C | C | C | R | W | K | Y | G | A | T | K | A | G | G | A | O | C | R | C |
AY907694 | 200450173 | Texel cross | ewe | ARH, VRQ | MALRHL, MVLRQL | R | T | Y | Y | G | W | G | Y | G | A | T | G | W | S | G | R | Y | Y | R | C |
EF189726 | 200665213 | Navajo Churro cross | ram | ARH, ARK | MALRHL, MALRKL | A | Y | Y | T | G | T | G | C | A | A | K | T | A | G | R | G | O | C | A | Y |
AY907685 | 200123331 | MARCIII Composite | ewe | VRQ, VRQ | MVLRQL, MVLRQL | R | C | Y | Y | R | W | G | C | G | G | K | G | W | S | R | G | O | Y | R | C |
EF189722 | 200665222 | Navajo Churro cross | ewe | VRQ, ARK | MVLRQL, MALRKL | R | C | T | T | G | W | K | Y | R | R | K | K | A | G | G | G | Y | Y | R | Y |
EF189728 | 200665931 | Barbados Black Belly | ram | ARK, ARK | MALRKL, MALRKL | R | Y | C | C | R | T | G | Y | A | G | T | K | T | S | A | A | Y | Y | R | T |
FJ404779 | 200117482 | MARCIII Composite | ewe | ARQ, ARR | MALRQL, MALRRL | R | Y | C | Y | A | A | K | C | A | R | G | T | T | S | G | A | Y | C | A | T |
FJ404777 | 200210034 | MARCIII Composite | ewe | ARQ, ARQ | MALRQL, TALRQL | R | C | T | C | A | A | K | C | A | A | G | T | A | C | G | R | T | C | A | Y |
FJ404778 | 200310125 | MARCIII Composite | ewe | ARQ, ARQ | TALRQL, TALRQL | G | T | Y | Y | R | A | K | Y | R | A | K | T | A | G | A | R | C | C | A | Y |
EF189723 | 200603590 | Navajo Churro cross | ram | ARQ, ARQ | MALRQL, TALRQL | G | T | C | C | A | W | K | T | R | R | T | G | T | S | R | R | Y | Y | G | C |
EF189724 | 200277004 | MARCIII Composite | ewe | ARQ, ARQ | MALRQL, MAFRQL | R | Y | C | C | R | W | K | Y | G | A | G | T | A | C | R | G | Y | C | G | C |
-d | - | - | - | ARQ, ARQ | MALRQL, MAFRQP | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
- | - | - | - | ARQ, ARQ | MAFRQL, MAFRQL | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
FJ404776 | 200865003 | MARCIII Composite | ewe | ARQ, ARQ | MAFRQL, MAFRQP | R | T | C | T | R | W | T | C | A | A | G | G | W | S | R | R | Y | Y | R | T |
GQ380576 | 200941201 | MARCIII Composite | ram | ARQ, ARQ | MAFRQP, MAFRQP | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |